RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 SLC1A4P43007 532 aa14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 HABP4Q5JVS0 413 aaKnown RBP14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 CWC27Q6UX04 472 aaKnown RBP14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 REPS2Q8NFH8 660 aa14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 CHURC1Q8WUH1 139 aa14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 DDX11Q96FC9 970 aa14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 DDX20Q9UHI6 824 aaKnown RBP14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 COLQQ9Y215 455 aaPredicted RBP14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 MTMR7Q9Y216 660 aa14.64□□□□□ -0.07
CDC42BPB-202ENST00000558321 ORC4O43929 436 aa14.63□□□□□ -0.07
CDC42BPB-202ENST00000558321 NMT2O60551 498 aa14.63□□□□□ -0.07
CDC42BPB-202ENST00000558321 HAND2P61296 217 aa14.63□□□□□ -0.07
CDC42BPB-202ENST00000558321 MAML3Q96JK9 1138 aa14.63□□□□□ -0.07
CDC42BPB-202ENST00000558321 RAVER2Q9HCJ3 691 aaKnown RBP14.63□□□□□ -0.07
CDC42BPB-202ENST00000558321 IL17RBQ9NRM6 502 aa14.63□□□□□ -0.07
CDC42BPB-202ENST00000558321 RLFQ13129 1914 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 MKI67P46013 3256 aaKnown RBP14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 STAT2P52630 851 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 PRAMEF19Q5SWL8 479 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 CHRDL2Q6WN34 429 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 MFSD6Q6ZSS7 791 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 FAM160B2Q86V87 743 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 C7orf61Q8IZ16 206 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 TRPV1Q8NER1 839 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 STAG1Q8WVM7 1258 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 GMCL1Q96IK5 515 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 SLC38A10Q9HBR0 1119 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 TACC3Q9Y6A5 838 aa14.62□□□□□ -0.07
CDC42BPB-202ENST00000558321 GREB1LQ9C091 1923 aaPredicted RBP14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 ZNF213O14771 459 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 ATP2A1O14983 1001 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 SLC34A2O95436 690 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 FGRP09769 529 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 FDX1P10109 184 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 CYBAP13498 195 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 ANO1Q5XXA6 986 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 RCSD1Q6JBY9 416 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 RNF41Q9H4P4 317 aaPredicted RBP14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 DIS3Q9Y2L1 958 aaKnown RBP14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 RIPK3Q9Y572 518 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 A0A0G2JMZ2 1700 aa14.61□□□□□ -0.07
CDC42BPB-202ENST00000558321 SEPT4O43236 478 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 IGHA2P01877 340 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 OAZ1P54368 228 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 CCDC96Q2M329 555 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 ZNF792Q3KQV3 632 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 AKNAD1Q5T1N1 836 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 ANKRD35Q8N283 1001 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 ARRDC4Q8NCT1 418 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 TINF2Q9BSI4 451 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 SENP6Q9GZR1 1112 aaPredicted RBP14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 FBXO40Q9UH90 709 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 ZMYM6O95789 1325 aa14.6□□□□□ -0.07
CDC42BPB-202ENST00000558321 TOP1P11387 765 aaKnown RBP14.59□□□□□ -0.07
CDC42BPB-202ENST00000558321 PCP11498 1178 aaKnown RBP14.59□□□□□ -0.07
CDC42BPB-202ENST00000558321 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
CDC42BPB-202ENST00000558321 HOMER2Q9NSB8 354 aa14.59□□□□□ -0.07
CDC42BPB-202ENST00000558321 CNPY2Q9Y2B0 182 aa14.59□□□□□ -0.07
CDC42BPB-202ENST00000558321 KBTBD13C9JR72 458 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 PLA2G6O60733 806 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 COL6A1P12109 1028 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 PDE4AP27815 886 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 SNAP25P60880 206 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 GJC2Q5T442 439 aaPredicted RBP14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 CCDC174Q6PII3 467 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 TBC1D10CQ8IV04 446 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 DCAF4Q8WV16 495 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 ESR2Q92731 530 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 TMEM47Q9BQJ4 181 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 TCP11L1Q9NUJ3 509 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 NRBP1Q9UHY1 535 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 CTNNA3Q9UI47 895 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 ZMYND8Q9ULU4 1186 aaPredicted RBP14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 PFASO15067 1338 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 MYH4Q9Y623 1939 aa14.58□□□□□ -0.08
CDC42BPB-202ENST00000558321 ZNF236Q9UL36 1845 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 DNM1LO00429 736 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 RARBP10826 455 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 NOVP48745 357 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 IMMTQ16891 758 aaKnown RBP14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 TTC22Q5TAA0 569 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 AGBL1Q96MI9 1066 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 TTC14Q96N46 770 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 DSCC1Q9BVC3 393 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 GPCPD1Q9NPB8 672 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 RBM27Q9P2N5 1060 aaKnown RBP14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 PRR12Q9ULL5 1215 aa14.57□□□□□ -0.08
CDC42BPB-202ENST00000558321 DNAJC25-GNG10A0A024R161 153 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 ALAS1P13196 640 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 TAL1P17542 331 aaPredicted RBP14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 SYN1P17600 705 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 SLC16A2P36021 539 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 ATN1P54259 1190 aaPredicted RBP14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 LRRC26Q2I0M4 334 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 TKFCQ3LXA3 575 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 TTBK2Q6IQ55 1244 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 MSL3Q8N5Y2 521 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms