RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 HAUS7Q99871 368 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 FSD1Q9BTV5 496 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 SFMBT1Q9UHJ3 866 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 SNX14Q9Y5W7 946 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 CCDC171Q6TFL3 1326 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 CDHR2Q9BYE9 1310 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 ABCC12Q96J65 1359 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 LAMB4A4D0S4 1761 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 STRCQ7RTU9 1775 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 RGPD5Q99666 1765 aa8.43□□□□□ -1.06
MARK3-212ENST00000558223 EYA2O00167 538 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 EML1O00423 815 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 PMLP29590 882 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 HIRAP54198 1017 aaPredicted RBP8.42□□□□□ -1.06
MARK3-212ENST00000558223 APOBRQ0VD83 1088 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 VPS72Q15906 364 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 CCDC57Q2TAC2 916 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 TSHZ3Q63HK5 1081 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 NBPF10Q6P3W6 841 aaKnown RBP8.42□□□□□ -1.06
MARK3-212ENST00000558223 FBXL19Q6PCT2 694 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 LMBR1LQ6UX01 489 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 CLEC4GQ6UXB4 293 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 CCDC81Q6ZN84 652 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 DDX42Q86XP3 938 aaKnown RBP eCLIP8.42□□□□□ -1.06
MARK3-212ENST00000558223 TMTC2Q8N394 836 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 ZBTB38Q8NAP3 1195 aaPredicted RBP8.42□□□□□ -1.06
MARK3-212ENST00000558223 HELLSQ9NRZ9 838 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 PDRG1Q9NUG6 133 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 PA2G4Q9UQ80 394 aaKnown RBP8.42□□□□□ -1.06
MARK3-212ENST00000558223 CD2APQ9Y5K6 639 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 DDX49Q9Y6V7 483 aaKnown RBP8.42□□□□□ -1.06
MARK3-212ENST00000558223 NHSL1Q5SYE7 1610 aa8.42□□□□□ -1.06
MARK3-212ENST00000558223 LRP6O75581 1613 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 PHACTR2O75167 634 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 LETM1O95202 739 aaPredicted RBP8.41□□□□□ -1.06
MARK3-212ENST00000558223 ALDH1A1P00352 501 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 HMGB2P26583 209 aaKnown RBP8.41□□□□□ -1.06
MARK3-212ENST00000558223 IL6STP40189 918 aaPredicted RBP8.41□□□□□ -1.06
MARK3-212ENST00000558223 EIF6P56537 245 aaKnown RBP8.41□□□□□ -1.06
MARK3-212ENST00000558223 FOXO4P98177 505 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 NFKB2Q00653 900 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 FAM160A1Q05DH4 1040 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 HLTFQ14527 1009 aaKnown RBP eCLIP8.41□□□□□ -1.06
MARK3-212ENST00000558223 TEAD4Q15561 434 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 MCMDC2Q4G0Z9 681 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 CCDC158Q5M9N0 1113 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 SH3PXD2AQ5TCZ1 1133 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 RUFY3Q7L099 469 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 KBTBD3Q8NAB2 608 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 TTC14Q96N46 770 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 TRIM56Q9BRZ2 755 aaKnown RBP8.41□□□□□ -1.06
MARK3-212ENST00000558223 PHACTR1Q9C0D0 580 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 CCDC8Q9H0W5 538 aaPredicted RBP8.41□□□□□ -1.06
MARK3-212ENST00000558223 BTG4Q9NY30 223 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 UBP1Q9NZI7 540 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 PTCH2Q9Y6C5 1203 aa8.41□□□□□ -1.06
MARK3-212ENST00000558223 XIRP1Q702N8 1843 aaKnown RBP8.4□□□□□ -1.06
MARK3-212ENST00000558223 KCPQ6ZWJ8 1503 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 MAP3K15Q6ZN16 1313 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 SH3TC1Q8TE82 1336 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 KCNQ2O43526 872 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 A1BGP04217 495 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 CSF1RP07333 972 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 ZNF445P59923 1031 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 TFCP2Q12800 502 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 TLR1Q15399 786 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 MAP3K11Q16584 847 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 FXNQ16595 210 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 C21orf62-AS1Q17RA5 79 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 SNAP47Q5SQN1 464 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 CREB3L3Q68CJ9 461 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 ZSCAN25Q6NSZ9 544 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 BLOC1S2Q6QNY1 142 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 ZNF438Q7Z4V0 828 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 SMARCC1Q92922 1105 aaPredicted RBP8.4□□□□□ -1.06
MARK3-212ENST00000558223 ZNF512BQ96KM6 892 aaPredicted RBP8.4□□□□□ -1.06
MARK3-212ENST00000558223 FAM126AQ9BYI3 521 aaPredicted RBP8.4□□□□□ -1.06
MARK3-212ENST00000558223 BOLA2Q9H3K6 86 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 CAAP1Q9H8G2 361 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 ARNT2Q9HBZ2 717 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 SMC3Q9UQE7 1217 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 FNDC3AQ9Y2H6 1198 aaKnown RBP8.4□□□□□ -1.06
MARK3-212ENST00000558223 KIF3AQ9Y496 699 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 USP3Q9Y6I4 520 aa8.4□□□□□ -1.06
MARK3-212ENST00000558223 COL14A1Q05707 1796 aaKnown RBP8.4□□□□□ -1.07
MARK3-212ENST00000558223 AHDC1Q5TGY3 1603 aaPredicted RBP8.4□□□□□ -1.07
MARK3-212ENST00000558223 DISP2A7MBM2 1401 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 PALLDQ8WX93 1383 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 JCADQ9P266 1359 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 MED23Q9ULK4 1368 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 TUBGCP6Q96RT7 1819 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 IFRD1O00458 451 aaPredicted RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 MYCLP1P12525 358 aaPredicted RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 CASTP20810 708 aaKnown RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 SOX5P35711 763 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms