RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 ABRAQ8N0Z2 381 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 TRIB2Q92519 343 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 APBA2Q99767 749 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 SPATC1LQ9H0A9 340 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 NAPBQ9H115 298 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 OSBPL3Q9H4L5 887 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 EPB41L4AQ9HCS5 686 aaPredicted RBP12.04□□□□□ -0.48
USP3-207ENST00000558218 SLC5A4Q9NY91 659 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
USP3-207ENST00000558218 IGKV6D-41A0A0C4DH26 115 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 PEX10O60683 326 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 ZKSCAN1P17029 563 aaPredicted RBP12.03□□□□□ -0.48
USP3-207ENST00000558218 COPB2P35606 906 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 NUCB1Q02818 461 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 GRB14Q14449 540 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 MCMDC2Q4G0Z9 681 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 KIAA1755Q5JYT7 1200 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 CHD1LQ86WJ1 897 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 NEDD1Q8NHV4 660 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 SEC62Q99442 399 aaKnown RBP12.03□□□□□ -0.48
USP3-207ENST00000558218 MOV10L1Q9BXT6 1211 aaKnown RBP12.03□□□□□ -0.48
USP3-207ENST00000558218 ANAPC4Q9UJX5 808 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 RLFQ13129 1914 aa12.03□□□□□ -0.48
USP3-207ENST00000558218 F5H6K3 240 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 FARP2O94887 1054 aaPredicted RBP12.02□□□□□ -0.49
USP3-207ENST00000558218 TTLL1O95922 423 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 FDX1P10109 184 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 ATP2B2Q01814 1243 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 KLRC3Q07444 240 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 PPARAQ07869 468 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 MFSD14CQ5VZR4 134 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 SPICE1Q8N0Z3 855 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 MTMR4Q9NYA4 1195 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 OGDHLQ9ULD0 1010 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 PPP1R9AQ9ULJ8 1098 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 NR2E3Q9Y5X4 410 aa12.02□□□□□ -0.49
USP3-207ENST00000558218 GREB1LQ9C091 1923 aaPredicted RBP12.01□□□□□ -0.49
USP3-207ENST00000558218 CENPFP49454 3210 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 VWA5AO00534 786 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 MSCO60682 206 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 IGHA2P01877 340 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 IGHDP01880 384 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 FGRP09769 529 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 TSPY3P0CV98 308 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 TSPY8P0CW00 308 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 ERCC3P19447 782 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 NT5C2P49902 561 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
USP3-207ENST00000558218 CACNB2Q08289 660 aaPredicted RBP12.01□□□□□ -0.49
USP3-207ENST00000558218 WDR78Q5VTH9 848 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 OLFML2BQ68BL8 750 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 NECAB2Q7Z6G3 386 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 DPP9Q86TI2 863 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 RIOX2Q8IUF8 465 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 CLEC10AQ8IUN9 316 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 ZNF687Q8N1G0 1237 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
USP3-207ENST00000558218 GMCL1P1Q8NEA9 526 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 EXOC6Q8TAG9 804 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 DPF3Q92784 378 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 LNPKQ9C0E8 428 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 CLIP2Q9UDT6 1046 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 PLIN4Q96Q06 1357 aa12.01□□□□□ -0.49
USP3-207ENST00000558218 ATP2A1O14983 1001 aa12□□□□□ -0.49
USP3-207ENST00000558218 PCP11498 1178 aaKnown RBP12□□□□□ -0.49
USP3-207ENST00000558218 FCER1AP12319 257 aa12□□□□□ -0.49
USP3-207ENST00000558218 STAT3P40763 770 aa12□□□□□ -0.49
USP3-207ENST00000558218 TFAP4Q01664 338 aa12□□□□□ -0.49
USP3-207ENST00000558218 TMEM132BQ14DG7 1078 aa12□□□□□ -0.49
USP3-207ENST00000558218 PLEKHM2Q8IWE5 1019 aa12□□□□□ -0.49
USP3-207ENST00000558218 ATG4CQ96DT6 458 aa12□□□□□ -0.49
USP3-207ENST00000558218 CEP95Q96GE4 821 aa12□□□□□ -0.49
USP3-207ENST00000558218 NBPF3Q9H094 633 aa12□□□□□ -0.49
USP3-207ENST00000558218 DIS3Q9Y2L1 958 aaKnown RBP12□□□□□ -0.49
USP3-207ENST00000558218 SUPT16HQ9Y5B9 1047 aaKnown RBP12□□□□□ -0.49
USP3-207ENST00000558218 ZMYM6O95789 1325 aa12□□□□□ -0.49
USP3-207ENST00000558218 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 HIP1O00291 1037 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 FOXP2O15409 715 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 ORC4O43929 436 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 EVI5O60447 810 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 NDUFB10O96000 172 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 FGAP02671 866 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 ADORA2AP29274 412 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 TRIM32Q13049 653 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 PLS1Q14651 629 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 CCL14Q16627 93 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 FAM83BQ5T0W9 1011 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 B4GALNT3Q6L9W6 998 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 NCAPG2Q86XI2 1143 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 PAWRQ96IZ0 340 aaKnown RBP11.99□□□□□ -0.49
USP3-207ENST00000558218 SLF1Q9BQI6 1058 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 NRBP1Q9UHY1 535 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 FEM1BQ9UK73 627 aa11.99□□□□□ -0.49
USP3-207ENST00000558218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.99□□□□□ -0.49
USP3-207ENST00000558218 PARP14Q460N5 1801 aa11.98□□□□□ -0.49
USP3-207ENST00000558218 A0A0G2JMZ2 1700 aa11.98□□□□□ -0.49
USP3-207ENST00000558218 DPYSL4O14531 572 aa11.98□□□□□ -0.49
USP3-207ENST00000558218 PLA2G6O60733 806 aa11.98□□□□□ -0.49
USP3-207ENST00000558218 PRDM1O75626 825 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms