RNA–Protein interactions for RNA: ENST00000558193.5

IPO4-204, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-204ENST00000558193 DDX11Q96FC9 970 aa23.7■■□□□ 1.38
IPO4-204ENST00000558193 HAUS7Q99871 368 aa23.7■■□□□ 1.38
IPO4-204ENST00000558193 SLF1Q9BQI6 1058 aa23.7■■□□□ 1.38
IPO4-204ENST00000558193 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.7■■□□□ 1.38
IPO4-204ENST00000558193 PUS7LQ9H0K6 701 aaKnown RBP23.7■■□□□ 1.38
IPO4-204ENST00000558193 RIPK3Q9Y572 518 aa23.7■■□□□ 1.38
IPO4-204ENST00000558193 DCDC2CA8MYV0 355 aa23.69■■□□□ 1.38
IPO4-204ENST00000558193 COPB2P35606 906 aa23.69■■□□□ 1.38
IPO4-204ENST00000558193 KCNA10Q16322 511 aa23.69■■□□□ 1.38
IPO4-204ENST00000558193 USP38Q8NB14 1042 aa23.69■■□□□ 1.38
IPO4-204ENST00000558193 TEX13BQ9BXU2 312 aa23.69■■□□□ 1.38
IPO4-204ENST00000558193 CHD9Q3L8U1 2897 aa23.69■■□□□ 1.38
IPO4-204ENST00000558193 MCM3APO60318 1980 aa23.69■■□□□ 1.38
IPO4-204ENST00000558193 MYO9BQ13459 2157 aa23.68■■□□□ 1.38
IPO4-204ENST00000558193 MUC3AQ02505 3323 aa23.68■■□□□ 1.38
IPO4-204ENST00000558193 ZBED9Q6R2W3 1325 aa23.68■■□□□ 1.38
IPO4-204ENST00000558193 SNAI1O95863 264 aaPredicted RBP23.68■■□□□ 1.38
IPO4-204ENST00000558193 ANKRD33Q7Z3H0 272 aa23.68■■□□□ 1.38
IPO4-204ENST00000558193 RPAP2Q8IXW5 612 aaPredicted RBP23.68■■□□□ 1.38
IPO4-204ENST00000558193 CPXCR1Q8N123 301 aa23.68■■□□□ 1.38
IPO4-204ENST00000558193 FAM184BQ9ULE4 1060 aa23.68■■□□□ 1.38
IPO4-204ENST00000558193 COG6Q9Y2V7 657 aa23.68■■□□□ 1.38
IPO4-204ENST00000558193 GREB1LQ9C091 1923 aaPredicted RBP23.67■■□□□ 1.38
IPO4-204ENST00000558193 TMEM265A0A087WTH1 108 aa23.67■■□□□ 1.38
IPO4-204ENST00000558193 RAB11FIP3O75154 756 aa23.67■■□□□ 1.38
IPO4-204ENST00000558193 UBE3CQ15386 1083 aa23.67■■□□□ 1.38
IPO4-204ENST00000558193 NUP133Q8WUM0 1156 aa23.67■■□□□ 1.38
IPO4-204ENST00000558193 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.67■■□□□ 1.382e-11■□□□□ 11
IPO4-204ENST00000558193 TSEN34Q9BSV6 310 aaKnown RBP23.67■■□□□ 1.38
IPO4-204ENST00000558193 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.66■■□□□ 1.38
IPO4-204ENST00000558193 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.66■■□□□ 1.38
IPO4-204ENST00000558193 ADCY6O43306 1168 aa23.66■■□□□ 1.38
IPO4-204ENST00000558193 NDUFB10O96000 172 aa23.66■■□□□ 1.38
IPO4-204ENST00000558193 KLHDC9Q8NEP7 349 aa23.66■■□□□ 1.38
IPO4-204ENST00000558193 VTI1AQ96AJ9 217 aa23.66■■□□□ 1.38
IPO4-204ENST00000558193 TOX2Q96NM4 488 aa23.66■■□□□ 1.38
IPO4-204ENST00000558193 ARPP21Q9UBL0 812 aaPredicted RBP23.66■■□□□ 1.38
IPO4-204ENST00000558193 SYNGAP1Q96PV0 1343 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 MOXD2PA6NHM9 499 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 GRXCR1A8MXD5 290 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 F5H6K3 240 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 TIMP1P01033 207 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 C6orf222P0C671 652 aaPredicted RBP23.65■■□□□ 1.38
IPO4-204ENST00000558193 RASA1P20936 1047 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 KLRC3Q07444 240 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 PPM1EQ8WY54 764 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 KIFC2Q96AC6 838 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 TIFAQ96CG3 184 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 ZNF576Q9H609 170 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 RAVER2Q9HCJ3 691 aaKnown RBP23.65■■□□□ 1.38
IPO4-204ENST00000558193 PRDM6Q9NQX0 595 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 TBX21Q9UL17 535 aa23.65■■□□□ 1.38
IPO4-204ENST00000558193 CTDP1Q9Y5B0 961 aaPredicted RBP23.65■■□□□ 1.38
IPO4-204ENST00000558193 MINDY4BA8MYZ0 360 aa23.64■■□□□ 1.37
IPO4-204ENST00000558193 SMARCA5O60264 1052 aaPredicted RBP23.64■■□□□ 1.37
IPO4-204ENST00000558193 CCSAPQ6IQ19 270 aaPredicted RBP23.64■■□□□ 1.37
IPO4-204ENST00000558193 GLT1D1Q96MS3 346 aa23.64■■□□□ 1.37
IPO4-204ENST00000558193 PPP1R12CQ9BZL4 782 aa23.64■■□□□ 1.37
IPO4-204ENST00000558193 MKNK2Q9HBH9 465 aa23.64■■□□□ 1.37
IPO4-204ENST00000558193 ZBTB40Q9NUA8 1239 aa23.64■■□□□ 1.37
IPO4-204ENST00000558193 MYH4Q9Y623 1939 aa23.63■■□□□ 1.37
IPO4-204ENST00000558193 DNAJC25-GNG10A0A024R161 153 aa23.63■■□□□ 1.37
IPO4-204ENST00000558193 DUSP11O75319 330 aaKnown RBP23.63■■□□□ 1.37
IPO4-204ENST00000558193 ASGR1P07306 291 aa23.63■■□□□ 1.37
IPO4-204ENST00000558193 PBX2P40425 430 aa23.63■■□□□ 1.37
IPO4-204ENST00000558193 ACVR2BQ13705 512 aa23.63■■□□□ 1.37
IPO4-204ENST00000558193 MAMDC4Q6UXC1 1216 aa23.63■■□□□ 1.37
IPO4-204ENST00000558193 CCDC129Q6ZRS4 1044 aa23.63■■□□□ 1.37
IPO4-204ENST00000558193 MSL3Q8N5Y2 521 aaKnown RBP23.63■■□□□ 1.37
IPO4-204ENST00000558193 PRPF38AQ8NAV1 312 aaKnown RBP23.63■■□□□ 1.37
IPO4-204ENST00000558193 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.63■■□□□ 1.37
IPO4-204ENST00000558193 CLIP2Q9UDT6 1046 aa23.63■■□□□ 1.37
IPO4-204ENST00000558193 ZBED4O75132 1171 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 ACRP10323 421 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 CSF2RAP15509 400 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 CCDC144BQ3MJ40 725 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 MFSD5Q6N075 450 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 ZSCAN25Q6NSZ9 544 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 C16orf59Q7L2K0 433 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 ANKRD35Q8N283 1001 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 SYMPKQ92797 1274 aaKnown RBP23.62■■□□□ 1.37
IPO4-204ENST00000558193 STRBPQ96SI9 672 aaKnown RBP23.62■■□□□ 1.37
IPO4-204ENST00000558193 HOMER2Q9NSB8 354 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 NYAP2Q9P242 653 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 DDX19BQ9UMR2 479 aa23.62■■□□□ 1.37
IPO4-204ENST00000558193 PRDM1O75626 825 aa23.61■■□□□ 1.37
IPO4-204ENST00000558193 LRRC47Q8N1G4 583 aaKnown RBP23.61■■□□□ 1.37
IPO4-204ENST00000558193 CHMP4CQ96CF2 233 aa23.61■■□□□ 1.37
IPO4-204ENST00000558193 FGD4Q96M96 766 aa23.61■■□□□ 1.37
IPO4-204ENST00000558193 ISY1Q9ULR0 285 aaKnown RBP23.61■■□□□ 1.37
IPO4-204ENST00000558193 GSG1L2A8MUP6 293 aa23.6■■□□□ 1.37
IPO4-204ENST00000558193 MS4A1P11836 297 aa23.6■■□□□ 1.37
IPO4-204ENST00000558193 PPIGQ13427 754 aaKnown RBP eCLIP23.6■■□□□ 1.374e-10■■□□□ 12.8
IPO4-204ENST00000558193 GNASQ5JWF2 1037 aa23.6■■□□□ 1.37
IPO4-204ENST00000558193 TMEM240Q5SV17 173 aa23.6■■□□□ 1.37
IPO4-204ENST00000558193 ARMCX2Q7L311 632 aa23.6■■□□□ 1.37
IPO4-204ENST00000558193 PBX4Q9BYU1 374 aa23.6■■□□□ 1.37
IPO4-204ENST00000558193 PRDM12Q9H4Q4 367 aa23.6■■□□□ 1.37
IPO4-204ENST00000558193 SPC25Q9HBM1 224 aa23.6■■□□□ 1.37
IPO4-204ENST00000558193 ELP1O95163 1332 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms