RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 IRF7Q92985 503 aa9.13□□□□□ -0.95
SPG11-205ENST00000558080 ZNF333Q96JL9 665 aa9.13□□□□□ -0.95
SPG11-205ENST00000558080 LRRCC1Q9C099 1032 aa9.13□□□□□ -0.95
SPG11-205ENST00000558080 AS3MTQ9HBK9 375 aa9.13□□□□□ -0.95
SPG11-205ENST00000558080 PAG1Q9NWQ8 432 aa9.13□□□□□ -0.95
SPG11-205ENST00000558080 SRRDQ9UH36 339 aa9.13□□□□□ -0.95
SPG11-205ENST00000558080 SLC45A1Q9Y2W3 748 aa9.13□□□□□ -0.95
SPG11-205ENST00000558080 MYPNQ86TC9 1320 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 MYH4Q9Y623 1939 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 POLR3DP05423 398 aaPredicted RBP9.12□□□□□ -0.95
SPG11-205ENST00000558080 ASNSP08243 561 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 ATP5JP18859 108 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 VARSP26640 1264 aaKnown RBP9.12□□□□□ -0.95
SPG11-205ENST00000558080 PRMT2P55345 433 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 FCGRTP55899 365 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 RRP1P56182 461 aaKnown RBP9.12□□□□□ -0.95
SPG11-205ENST00000558080 MTMR2Q13614 643 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 LINC01559Q495D7 138 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 SLFNL1Q499Z3 407 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 METTL16Q86W50 562 aaKnown RBP9.12□□□□□ -0.95
SPG11-205ENST00000558080 CERS3Q8IU89 383 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 ANKRD13CQ8N6S4 541 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 ZNF511Q8NB15 262 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 BAP1Q92560 729 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 RIOK1Q9BRS2 568 aaKnown RBP9.12□□□□□ -0.95
SPG11-205ENST00000558080 WDR18Q9BV38 432 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 CRNKL1Q9BZJ0 848 aaKnown RBP9.12□□□□□ -0.95
SPG11-205ENST00000558080 TMOD4Q9NZQ9 345 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 BIN2Q9UBW5 565 aaPredicted RBP9.12□□□□□ -0.95
SPG11-205ENST00000558080 ZBTB21Q9ULJ3 1066 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 GABRQQ9UN88 632 aa9.12□□□□□ -0.95
SPG11-205ENST00000558080 COL11A1P12107 1806 aaPredicted RBP9.12□□□□□ -0.95
SPG11-205ENST00000558080 PARP14Q460N5 1801 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 TCRBV5S4A2TA0A5A2 114 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 H3BM21 787 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 GH2P01242 217 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 CHGBP05060 677 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 GRK4P32298 578 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 GMPRP36959 345 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 PLCD1P51178 756 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 BACE1P56817 501 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 IRX6P78412 446 aaPredicted RBP9.11□□□□□ -0.95
SPG11-205ENST00000558080 PRKCZQ05513 592 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 PABPC4Q13310 644 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPG11-205ENST00000558080 AMHR2Q16671 573 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 SH3D19Q5HYK7 790 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 TMED8Q6PL24 325 aaPredicted RBP9.11□□□□□ -0.95
SPG11-205ENST00000558080 LCORLQ8N3X6 602 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 HAUS7Q99871 368 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 ASCC2Q9H1I8 757 aaPredicted RBP9.11□□□□□ -0.95
SPG11-205ENST00000558080 ARMT1Q9H993 441 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 MCM9Q9NXL9 1143 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 PPP4R2Q9NY27 417 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 SERPINB13Q9UIV8 391 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 RLFQ13129 1914 aa9.11□□□□□ -0.95
SPG11-205ENST00000558080 FAM181BA6NEQ2 426 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 C19orf81C9J6K1 198 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 USP17L10C9JJH3 530 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 TNPO2O14787 897 aaKnown RBP9.1□□□□□ -0.95
SPG11-205ENST00000558080 PRKAB2O43741 272 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 CYP2D6P10635 497 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
SPG11-205ENST00000558080 ADD2P35612 726 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 IRX3P78415 501 aaPredicted RBP9.1□□□□□ -0.95
SPG11-205ENST00000558080 RAB3GAP1Q15042 981 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 MTFR1Q15390 333 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 ZYXQ15942 572 aaKnown RBP9.1□□□□□ -0.95
SPG11-205ENST00000558080 ABCB5Q2M3G0 1257 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 CERKLQ49MI3 558 aaPredicted RBP9.1□□□□□ -0.95
SPG11-205ENST00000558080 TATDN1Q6P1N9 297 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 SDR42E1Q8WUS8 393 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 ZFP42Q96MM3 310 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 P2RX7Q99572 595 aaKnown RBP9.1□□□□□ -0.95
SPG11-205ENST00000558080 EHD4Q9H223 541 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 DCTPP1Q9H773 170 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 GINM1Q9NU53 330 aa9.1□□□□□ -0.95
SPG11-205ENST00000558080 TRIOBPQ9H2D6 2365 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 ALPK3Q96L96 1907 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 ADCY3O60266 1144 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 PEX10O60683 326 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 MBD4O95243 580 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 CCL5P13501 91 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 ELNP15502 786 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 SHMT1P34896 483 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 GCLCP48506 637 aaPredicted RBP9.09□□□□□ -0.95
SPG11-205ENST00000558080 FLT3LGP49771 235 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 NNTQ13423 1086 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 USP17L2Q6R6M4 530 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 COA7Q96BR5 231 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 FEZ1Q99689 392 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.09□□□□□ -0.95
SPG11-205ENST00000558080 CABP5Q9NP86 173 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 DCP1AQ9NPI6 582 aaPredicted RBP9.09□□□□□ -0.95
SPG11-205ENST00000558080 PCDHB15Q9Y5E8 787 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 SMCHD1A6NHR9 2005 aa9.09□□□□□ -0.95
SPG11-205ENST00000558080 MPHOSPH10O00566 681 aaKnown RBP9.08□□□□□ -0.96
SPG11-205ENST00000558080 HOXA7P31268 230 aaPredicted RBP9.08□□□□□ -0.96
SPG11-205ENST00000558080 FAM110CQ1W6H9 321 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms