RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 CNGA1P29973 690 aa19.23■□□□□ 0.67
AC027088.1-201ENST00000557966 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
AC027088.1-201ENST00000557966 SNRNP48Q6IEG0 339 aaKnown RBP19.23■□□□□ 0.67
AC027088.1-201ENST00000557966 PRPF38AQ8NAV1 312 aaKnown RBP19.23■□□□□ 0.67
AC027088.1-201ENST00000557966 KIFC2Q96AC6 838 aa19.23■□□□□ 0.67
AC027088.1-201ENST00000557966 TEX13BQ9BXU2 312 aa19.23■□□□□ 0.67
AC027088.1-201ENST00000557966 ZMYM6O95789 1325 aa19.23■□□□□ 0.67
AC027088.1-201ENST00000557966 ORC4O43929 436 aa19.22■□□□□ 0.67
AC027088.1-201ENST00000557966 BMP3P12645 472 aa19.22■□□□□ 0.67
AC027088.1-201ENST00000557966 PRAMEF19Q5SWL8 479 aa19.22■□□□□ 0.67
AC027088.1-201ENST00000557966 CHMP4CQ96CF2 233 aa19.22■□□□□ 0.67
AC027088.1-201ENST00000557966 PRO3102Q9H379 93 aa19.22■□□□□ 0.67
AC027088.1-201ENST00000557966 FEM1BQ9UK73 627 aa19.22■□□□□ 0.67
AC027088.1-201ENST00000557966 STX8Q9UNK0 236 aa19.22■□□□□ 0.67
AC027088.1-201ENST00000557966 RANBP6O60518 1105 aaKnown RBP19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 COPB2P35606 906 aa19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 NOVP48745 357 aa19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 KCTD2Q14681 263 aa19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 ZNF792Q3KQV3 632 aa19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 C7orf61Q8IZ16 206 aa19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 SLC38A10Q9HBR0 1119 aa19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 RAVER2Q9HCJ3 691 aaKnown RBP19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 SLC5A4Q9NY91 659 aa19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 RBM27Q9P2N5 1060 aaKnown RBP19.21■□□□□ 0.67
AC027088.1-201ENST00000557966 TMEM232C9JQI7 657 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 ATP2A1O14983 1001 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 MSCO60682 206 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 PDE4AP27815 886 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 HAND2P61296 217 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 ANO1Q5XXA6 986 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 PPP4R3CPQ6ZMV5 832 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 CPXCR1Q8N123 301 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 GMCL1Q96IK5 515 aa19.2■□□□□ 0.66
AC027088.1-201ENST00000557966 ZBED4O75132 1171 aa19.19■□□□□ 0.66
AC027088.1-201ENST00000557966 MCCP23508 829 aa19.19■□□□□ 0.66
AC027088.1-201ENST00000557966 FXR1P51114 621 aaKnown RBP eCLIP19.19■□□□□ 0.66
AC027088.1-201ENST00000557966 TBC1D10CQ8IV04 446 aa19.19■□□□□ 0.66
AC027088.1-201ENST00000557966 PCDH10Q9P2E7 1040 aa19.19■□□□□ 0.66
AC027088.1-201ENST00000557966 PLXNA1Q9UIW2 1896 aa19.19■□□□□ 0.66
AC027088.1-201ENST00000557966 ZNFX1Q9P2E3 1918 aaKnown RBP19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 SEPT4O43236 478 aa19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 SLC1A4P43007 532 aa19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 SLC4A3P48751 1232 aa19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 STAT2P52630 851 aa19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 LRRC26Q2I0M4 334 aa19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 RRP12Q5JTH9 1297 aaKnown RBP19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 KCTD1Q719H9 257 aa19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 TINF2Q9BSI4 451 aa19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 TOMM22Q9NS69 142 aa19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 ISY1Q9ULR0 285 aaKnown RBP19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 ZMYND8Q9ULU4 1186 aaPredicted RBP19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 DIS3Q9Y2L1 958 aaKnown RBP19.18■□□□□ 0.66
AC027088.1-201ENST00000557966 CEP290O15078 2479 aa19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 LAMA4Q16363 1823 aa19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 DNAJC25-GNG10A0A024R161 153 aa19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 TAL1P17542 331 aaPredicted RBP19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 PPP4R3BQ5MIZ7 849 aa19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 CWC27Q6UX04 472 aaKnown RBP19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 CTDP1Q9Y5B0 961 aaPredicted RBP19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 ZNF536O15090 1300 aa19.17■□□□□ 0.66
AC027088.1-201ENST00000557966 DNM1LO00429 736 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 GSPT1P15170 499 aaKnown RBP19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 SYN1P17600 705 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 OAZ1P54368 228 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 GJC2Q5T442 439 aaPredicted RBP19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 FAM160B2Q86V87 743 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 FGD4Q96M96 766 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 IL25Q9H293 177 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 DIAPH3Q9NSV4 1193 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 MTMR7Q9Y216 660 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 NEDD4P46934 1319 aa19.16■□□□□ 0.66
AC027088.1-201ENST00000557966 ZNF865P0CJ78 1059 aaPredicted RBP19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 MFAP1P55081 439 aaKnown RBP19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 SNAP25P60880 206 aa19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 IKQ13123 557 aaPredicted RBP19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 AKNAD1Q5T1N1 836 aa19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 RCSD1Q6JBY9 416 aa19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 TMEM47Q9BQJ4 181 aa19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 SENP6Q9GZR1 1112 aaPredicted RBP19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 TCP11L1Q9NUJ3 509 aa19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 NRBP1Q9UHY1 535 aa19.15■□□□□ 0.66
AC027088.1-201ENST00000557966 RANBP2P49792 3224 aaKnown RBP19.14■□□□□ 0.66
AC027088.1-201ENST00000557966 PLA2G6O60733 806 aa19.14■□□□□ 0.65
AC027088.1-201ENST00000557966 CHST13Q8NET6 341 aa19.14■□□□□ 0.65
AC027088.1-201ENST00000557966 CHURC1Q8WUH1 139 aa19.14■□□□□ 0.65
AC027088.1-201ENST00000557966 DDX11Q96FC9 970 aa19.14■□□□□ 0.65
AC027088.1-201ENST00000557966 AGBL1Q96MI9 1066 aa19.14■□□□□ 0.65
AC027088.1-201ENST00000557966 HOMER2Q9NSB8 354 aa19.14■□□□□ 0.65
AC027088.1-201ENST00000557966 PRR12Q9ULL5 1215 aa19.14■□□□□ 0.65
AC027088.1-201ENST00000557966 FDX1P10109 184 aa19.13■□□□□ 0.65
AC027088.1-201ENST00000557966 TOP1P11387 765 aaKnown RBP19.13■□□□□ 0.65
AC027088.1-201ENST00000557966 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
AC027088.1-201ENST00000557966 TTBK2Q6IQ55 1244 aa19.13■□□□□ 0.65
AC027088.1-201ENST00000557966 MFSD6Q6ZSS7 791 aa19.13■□□□□ 0.65
AC027088.1-201ENST00000557966 DCAF4Q8WV16 495 aa19.13■□□□□ 0.65
AC027088.1-201ENST00000557966 LENG1Q96BZ8 264 aaPredicted RBP19.13■□□□□ 0.65
AC027088.1-201ENST00000557966 GDF15Q99988 308 aa19.13■□□□□ 0.65
AC027088.1-201ENST00000557966 FBXO40Q9UH90 709 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms