RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 JAK2O60674 1132 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 FOSP01100 380 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-213ENST00000557765 INPP5BP32019 993 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 VGLL4Q14135 290 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 PKN1Q16512 942 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 SKOR2Q2VWA4 1001 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-213ENST00000557765 SYDE2Q5VT97 1194 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 JMYQ8N9B5 988 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
GABRB3-213ENST00000557765 GBA2Q9HCG7 927 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-213ENST00000557765 PNMA3Q9UL41 463 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 NOL7Q9UMY1 257 aaKnown RBP12.09□□□□□ -0.47
GABRB3-213ENST00000557765 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 ZHX2Q9Y6X8 837 aa12.09□□□□□ -0.47
GABRB3-213ENST00000557765 A0A0G2JLL6 359 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-213ENST00000557765 VPS37CA5D8V6 355 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-213ENST00000557765 ADM5C9JUS6 153 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 PIK3CDO00329 1044 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 TOMM70O94826 608 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 PLEKHA8P1O95397 391 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 KRT2P35908 639 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 GTF2A2P52657 109 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 SPP2Q13103 211 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 AP3B2Q13367 1082 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 SNAPC2Q13487 334 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 TTLL12Q14166 644 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-213ENST00000557765 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
GABRB3-213ENST00000557765 COG2Q14746 738 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 KRT40Q6A162 431 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 PRRT2Q7Z6L0 340 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-213ENST00000557765 MCF2L2Q86YR7 1114 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 NOSTRINQ8IVI9 506 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 CCDC144CPQ8IYA2 1237 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 ADGRF4Q8IZF3 695 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 STAG2Q8N3U4 1231 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 TMEM87AQ8NBN3 555 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 PHKBQ93100 1093 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 DDX11Q96FC9 970 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 RANBP17Q9H2T7 1088 aaKnown RBP12.08□□□□□ -0.48
GABRB3-213ENST00000557765 EHMT1Q9H9B1 1298 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 JMJD4Q9H9V9 463 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 PCDHA4Q9UN74 947 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 MRPL11Q9Y3B7 192 aaKnown RBP12.08□□□□□ -0.48
GABRB3-213ENST00000557765 ABCB11O95342 1321 aa12.08□□□□□ -0.48
GABRB3-213ENST00000557765 TMEM232C9JQI7 657 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 LAD1O00515 517 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 CYTH3O43739 400 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 ZBED4O75132 1171 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 CETPP11597 493 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 VCAM1P19320 739 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 RXRAP19793 462 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 GHRHRQ02643 423 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 IKQ13123 557 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-213ENST00000557765 KRT25Q7Z3Z0 450 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 CDAN1Q8IWY9 1227 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 TNPO1Q92973 898 aaKnown RBP12.07□□□□□ -0.48
GABRB3-213ENST00000557765 CUL5Q93034 780 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 GLIS2Q9BZE0 524 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-213ENST00000557765 POLR3EQ9NVU0 708 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 PPP1R9AQ9ULJ8 1098 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 ADAMTS5Q9UNA0 930 aa12.07□□□□□ -0.48
GABRB3-213ENST00000557765 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 IRF6O14896 467 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 YEATS4O95619 227 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 ITGBL1O95965 494 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-213ENST00000557765 ICAM1P05362 532 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
GABRB3-213ENST00000557765 ECE1P42892 770 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 NAPAP54920 295 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 NLRP5P59047 1200 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 KIF23Q02241 960 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-213ENST00000557765 MTMR2Q13614 643 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
GABRB3-213ENST00000557765 CATSPERGQ6ZRH7 1159 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
GABRB3-213ENST00000557765 FBXO11Q86XK2 927 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 BLIDQ8IZY5 108 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 KCNG4Q8TDN1 519 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 ACER1Q8TDN7 264 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-213ENST00000557765 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 RIC8AQ9NPQ8 531 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.06□□□□□ -0.48
GABRB3-213ENST00000557765 FBXO40Q9UH90 709 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 PRR12Q9ULL5 1215 aa12.06□□□□□ -0.48
GABRB3-213ENST00000557765 CTDP1Q9Y5B0 961 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-213ENST00000557765 POLR2AP24928 1970 aaKnown RBP12.05□□□□□ -0.48
GABRB3-213ENST00000557765 MBD3O95983 291 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 GCFC2P16383 781 aaKnown RBP12.05□□□□□ -0.48
GABRB3-213ENST00000557765 OSBPP22059 807 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 JAG1P78504 1218 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 RESTQ13127 1097 aa12.05□□□□□ -0.48
GABRB3-213ENST00000557765 CDC37Q16543 378 aaPredicted RBP12.05□□□□□ -0.48
GABRB3-213ENST00000557765 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms