RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TINF2Q9BSI4 451 aa19.79■□□□□ 0.76
NEK9-211ENST00000557673 PHF24Q9UPV7 400 aa19.79■□□□□ 0.76
NEK9-211ENST00000557673 RLFQ13129 1914 aa19.78■□□□□ 0.76
NEK9-211ENST00000557673 GSG1L2A8MUP6 293 aa19.78■□□□□ 0.76
NEK9-211ENST00000557673 TRIM6-TRIM34B2RNG4 842 aa19.78■□□□□ 0.76
NEK9-211ENST00000557673 TLE2Q04725 743 aa19.78■□□□□ 0.76
NEK9-211ENST00000557673 SEC62Q99442 399 aaKnown RBP19.78■□□□□ 0.76
NEK9-211ENST00000557673 CDX2Q99626 313 aaPredicted RBP19.78■□□□□ 0.76
NEK9-211ENST00000557673 SEMA6BQ9H3T3 888 aa19.78■□□□□ 0.76
NEK9-211ENST00000557673 ARPP21Q9UBL0 812 aaPredicted RBP19.78■□□□□ 0.76
NEK9-211ENST00000557673 CNPY2Q9Y2B0 182 aa19.78■□□□□ 0.76
NEK9-211ENST00000557673 UNC80Q8N2C7 3258 aa19.77■□□□□ 0.76
NEK9-211ENST00000557673 TRIM43BA6NCK2 446 aa19.77■□□□□ 0.76
NEK9-211ENST00000557673 VWA5AO00534 786 aa19.77■□□□□ 0.76
NEK9-211ENST00000557673 C9orf50Q5SZB4 431 aa19.77■□□□□ 0.76
NEK9-211ENST00000557673 TICAM2Q86XR7 235 aa19.77■□□□□ 0.76
NEK9-211ENST00000557673 TRIM43Q96BQ3 446 aaPredicted RBP19.77■□□□□ 0.76
NEK9-211ENST00000557673 COL25A1Q9BXS0 654 aaPredicted RBP19.77■□□□□ 0.76
NEK9-211ENST00000557673 EPB41L4AQ9HCS5 686 aaPredicted RBP19.77■□□□□ 0.76
NEK9-211ENST00000557673 PPP1R9AQ9ULJ8 1098 aa19.77■□□□□ 0.76
NEK9-211ENST00000557673 RAD21O60216 631 aa19.76■□□□□ 0.75
NEK9-211ENST00000557673 PGK2P07205 417 aa19.76■□□□□ 0.75
NEK9-211ENST00000557673 CLTBP09497 229 aa19.76■□□□□ 0.75
NEK9-211ENST00000557673 AKR1A1P14550 325 aa19.76■□□□□ 0.75
NEK9-211ENST00000557673 ZNF792Q3KQV3 632 aa19.76■□□□□ 0.75
NEK9-211ENST00000557673 MSL3Q8N5Y2 521 aaKnown RBP19.76■□□□□ 0.75
NEK9-211ENST00000557673 RILPL2Q969X0 211 aa19.76■□□□□ 0.75
NEK9-211ENST00000557673 LTBP2Q14767 1821 aa19.76■□□□□ 0.75
NEK9-211ENST00000557673 ROBO3Q96MS0 1386 aa19.75■□□□□ 0.75
NEK9-211ENST00000557673 ZMYM1Q5SVZ6 1142 aa19.75■□□□□ 0.75
NEK9-211ENST00000557673 GIMAP6Q6P9H5 292 aa19.75■□□□□ 0.75
NEK9-211ENST00000557673 SH3RF1Q7Z6J0 888 aa19.75■□□□□ 0.75
NEK9-211ENST00000557673 STK11IPQ8N1F8 1099 aa19.75■□□□□ 0.75
NEK9-211ENST00000557673 TSEN34Q9BSV6 310 aaKnown RBP19.75■□□□□ 0.75
NEK9-211ENST00000557673 FBXO28Q9NVF7 368 aa19.75■□□□□ 0.75
NEK9-211ENST00000557673 LAMA4Q16363 1823 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 TMEM265A0A087WTH1 108 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 MINDY4BA8MYZ0 360 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 PGK1P00558 417 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 APPP05067 770 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 RAG1P15918 1043 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 GNAT2P19087 354 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 SDSP20132 328 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 TDO2P48775 406 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 SBK1Q52WX2 424 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 FAM83BQ5T0W9 1011 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 MAFAQ8NHW3 353 aaPredicted RBP19.74■□□□□ 0.75
NEK9-211ENST00000557673 NUP133Q8WUM0 1156 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 TEX13BQ9BXU2 312 aa19.74■□□□□ 0.75
NEK9-211ENST00000557673 ZNF214Q9UL59 606 aaPredicted RBP19.74■□□□□ 0.75
NEK9-211ENST00000557673 A0A1W2PQ45 241 aaPredicted RBP19.73■□□□□ 0.75
NEK9-211ENST00000557673 A0A1W2PQY0 241 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 DCDC2CA8MYV0 355 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 KIAA0355O15063 1070 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 DDX11Q96FC9 970 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 RNPC3Q96LT9 517 aaKnown RBP19.73■□□□□ 0.75
NEK9-211ENST00000557673 TOX2Q96NM4 488 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 SLF1Q9BQI6 1058 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 TMEM39AQ9NV64 488 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 FAM184BQ9ULE4 1060 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 SYNGAP1Q96PV0 1343 aa19.73■□□□□ 0.75
NEK9-211ENST00000557673 GREB1LQ9C091 1923 aaPredicted RBP19.72■□□□□ 0.75
NEK9-211ENST00000557673 A0A0D9SFI3 127 aa19.72■□□□□ 0.75
NEK9-211ENST00000557673 PQBP1O60828 265 aaKnown RBP19.72■□□□□ 0.75
NEK9-211ENST00000557673 ZNF865P0CJ78 1059 aaPredicted RBP19.72■□□□□ 0.75
NEK9-211ENST00000557673 TAL1P17542 331 aaPredicted RBP19.72■□□□□ 0.75
NEK9-211ENST00000557673 CCDC129Q6ZRS4 1044 aa19.72■□□□□ 0.75
NEK9-211ENST00000557673 REPS2Q8NFH8 660 aa19.72■□□□□ 0.75
NEK9-211ENST00000557673 MKNK2Q9HBH9 465 aa19.72■□□□□ 0.75
NEK9-211ENST00000557673 CTDP1Q9Y5B0 961 aaPredicted RBP19.72■□□□□ 0.75
NEK9-211ENST00000557673 ZNFX1Q9P2E3 1918 aaKnown RBP19.71■□□□□ 0.75
NEK9-211ENST00000557673 MOXD2PA6NHM9 499 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 PATL2C9JE40 543 aaKnown RBP19.71■□□□□ 0.75
NEK9-211ENST00000557673 RASA1P20936 1047 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 FPGSQ05932 587 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
NEK9-211ENST00000557673 BMP2KLQ5H9B9 411 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 SNRNP48Q6IEG0 339 aaKnown RBP19.71■□□□□ 0.75
NEK9-211ENST00000557673 ANKRD33Q7Z3H0 272 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 IFNL3Q8IZI9 196 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 PRPF38AQ8NAV1 312 aaKnown RBP19.71■□□□□ 0.75
NEK9-211ENST00000557673 FAM227BQ96M60 508 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 ZNF287Q9HBT7 754 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 STARD7Q9NQZ5 370 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 NYAP2Q9P242 653 aa19.71■□□□□ 0.75
NEK9-211ENST00000557673 SMCHD1A6NHR9 2005 aa19.7■□□□□ 0.74
NEK9-211ENST00000557673 ZBED4O75132 1171 aa19.7■□□□□ 0.74
NEK9-211ENST00000557673 ACLYP53396 1101 aa19.7■□□□□ 0.74
NEK9-211ENST00000557673 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.7■□□□□ 0.74
NEK9-211ENST00000557673 TTYH1Q9H313 450 aaPredicted RBP19.7■□□□□ 0.74
NEK9-211ENST00000557673 DIAPH3Q9NSV4 1193 aa19.7■□□□□ 0.74
NEK9-211ENST00000557673 F5H6K3 240 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 HIP1O00291 1037 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 ATP2A1O14983 1001 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 ADAMTS4O75173 837 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 FOSL2P15408 326 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 ITGB8P26012 769 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 KLRC3Q07444 240 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 CCDC174Q6PII3 467 aa19.69■□□□□ 0.74
NEK9-211ENST00000557673 MAMDC4Q6UXC1 1216 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms