RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ZNF34Q8IZ26 560 aa13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 HDAC6Q9UBN7 1215 aa13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 CAPN11Q9UMQ6 739 aa13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 MAPK8IP1Q9UQF2 711 aa13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 ZBTB1Q9Y2K1 713 aa13.27□□□□□ -0.28
VIPAS39-211ENST00000557658 DLEC1Q9Y238 1755 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 KRT86O43790 486 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 SYF2O95926 243 aaKnown RBP13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 MCM7P33993 719 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 HERVK_113P62684 666 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 MAPK8IP2Q13387 824 aaPredicted RBP13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 ARL6IP4Q66PJ3 421 aaKnown RBP13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 DZIP3Q86Y13 1208 aaKnown RBP13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 HPCAL4Q9UM19 191 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 CNTNAP5Q8WYK1 1306 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 PES1O00541 588 aaKnown RBP13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 PCP11498 1178 aaKnown RBP13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 CYLC1P35663 651 aaPredicted RBP13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 STAT6P42226 847 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 MAGEA9P43362 315 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 STIM1Q13586 685 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 IL17AQ16552 155 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 ADGRA1Q86SQ6 560 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 IRF2BP1Q8IU81 584 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 ADSSL1Q8N142 457 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 COG1Q8WTW3 980 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 JAKMIP2Q96AA8 810 aa13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 MAGEC2Q9UBF1 373 aaPredicted RBP13.27□□□□□ -0.29
VIPAS39-211ENST00000557658 COL22A1Q8NFW1 1626 aaPredicted RBP13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 PRPF6O94906 941 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 IPO7O95373 1038 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 EVA1CP58658 441 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 CTR9Q6PD62 1173 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 ZNF507Q8TCN5 953 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 THAP9Q9H5L6 903 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 ABCF2Q9UG63 623 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 PDS5AQ29RF7 1337 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 ITGB4P16144 1822 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 BAZ2AQ9UIF9 1905 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 TRIM49BA6NDI0 452 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 PPFIA4O75335 1185 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 SCG2P13521 617 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 DNM2P50570 870 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 WDR59Q6PJI9 974 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 CAGE1Q8TC20 777 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 CRACR2AQ9BSW2 395 aa13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 ZNHIT6Q9NWK9 470 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-211ENST00000557658 BAZ2BQ9UIF8 2168 aaKnown RBP13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 EIF3CLB5ME19 914 aaKnown RBP13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 SRGAP2O75044 1071 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 IQCEQ6IPM2 695 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 SRBD1Q8N5C6 995 aaKnown RBP13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 EIF3CQ99613 913 aaKnown RBP13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 BRIP1Q9BX63 1249 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 ANO9A1A5B4 782 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 PSMA7O14818 248 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 IL6STP40189 918 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 KCNB1Q14721 858 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 MEA1Q16626 185 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 NOC3LQ8WTT2 800 aaKnown RBP13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 TRIM47Q96LD4 638 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 NUP58Q9BVL2 599 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 DISC1Q9NRI5 854 aa13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 GNL3LQ9NVN8 582 aaKnown RBP13.25□□□□□ -0.29
VIPAS39-211ENST00000557658 FGRP09769 529 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 EIF5P55010 431 aaKnown RBP13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 CCDC152Q4G0S7 254 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 CCDC70Q6NSX1 233 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 CCDC170Q8IYT3 715 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 IPO4Q8TEX9 1081 aaKnown RBP13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 RIOK1Q9BRS2 568 aaKnown RBP13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 NHSL1Q5SYE7 1610 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 KAT6BQ8WYB5 2073 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 ZC3H4Q9UPT8 1303 aaKnown RBP13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 CYP2D7A0A087X1C5 515 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 MYL1P05976 194 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 SRGNP10124 158 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 CALML3P27482 149 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 CORO7P57737 925 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 SEMA3FQ13275 785 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 PFKFB3Q16875 520 aaPredicted RBP13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 CCNI2Q6ZMN8 369 aaPredicted RBP13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 RASSF8Q8NHQ8 419 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
VIPAS39-211ENST00000557658 STRCP1A6NGW2 1772 aa13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 TRIM21P19474 475 aaKnown RBP13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 NOP2P46087 812 aaKnown RBP13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 TTC31Q49AM3 519 aaPredicted RBP13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 C4orf32Q8N8J7 132 aa13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 PPM1EQ8WY54 764 aa13.23□□□□□ -0.29
VIPAS39-211ENST00000557658 SELENOOQ9BVL4 669 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms