RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 GNAQP50148 359 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 IRX3P78415 501 aaPredicted RBP16.45■□□□□ 0.22
RIPK3-206ENST00000557624 ST3GAL1Q11201 340 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 SREBF2Q12772 1141 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 PPP2R5BQ15173 497 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 CATSPERGQ6ZRH7 1159 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 NBPF11Q86T75 865 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 PTPN18Q99952 460 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 SLF1Q9BQI6 1058 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
RIPK3-206ENST00000557624 PARP14Q460N5 1801 aa16.44■□□□□ 0.22
RIPK3-206ENST00000557624 PDHXO00330 501 aa16.44■□□□□ 0.22
RIPK3-206ENST00000557624 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
RIPK3-206ENST00000557624 PABPC4Q13310 644 aaKnown RBP eCLIP16.44■□□□□ 0.22
RIPK3-206ENST00000557624 ANKRD23Q86SG2 305 aa16.44■□□□□ 0.22
RIPK3-206ENST00000557624 SRBD1Q8N5C6 995 aaKnown RBP16.44■□□□□ 0.22
RIPK3-206ENST00000557624 CHURC1Q8WUH1 139 aa16.44■□□□□ 0.22
RIPK3-206ENST00000557624 PIBF1Q8WXW3 757 aa16.44■□□□□ 0.22
RIPK3-206ENST00000557624 VAT1LQ9HCJ6 419 aa16.44■□□□□ 0.22
RIPK3-206ENST00000557624 TESPA1A2RU30 521 aaPredicted RBP16.43■□□□□ 0.22
RIPK3-206ENST00000557624 IGF2BP3O00425 579 aaKnown RBP eCLIP16.43■□□□□ 0.22
RIPK3-206ENST00000557624 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
RIPK3-206ENST00000557624 SYDE2Q5VT97 1194 aa16.43■□□□□ 0.22
RIPK3-206ENST00000557624 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
RIPK3-206ENST00000557624 FAM160B2Q86V87 743 aa16.43■□□□□ 0.22
RIPK3-206ENST00000557624 LZTS2Q9BRK4 669 aa16.43■□□□□ 0.22
RIPK3-206ENST00000557624 ASCC2Q9H1I8 757 aaPredicted RBP16.43■□□□□ 0.22
RIPK3-206ENST00000557624 PRR12Q9ULL5 1215 aa16.43■□□□□ 0.22
RIPK3-206ENST00000557624 RLFQ13129 1914 aa16.43■□□□□ 0.22
RIPK3-206ENST00000557624 CYTH3O43739 400 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 OSBPP22059 807 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 INHBEP58166 350 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 SNAP25P60880 206 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 BECN1Q14457 450 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 COG2Q14746 738 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 BTNL9Q6UXG8 535 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 ADGRF4Q8IZF3 695 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
RIPK3-206ENST00000557624 PHKBQ93100 1093 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 PPP1R9AQ9ULJ8 1098 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 MYH6P13533 1939 aa16.42■□□□□ 0.22
RIPK3-206ENST00000557624 hCG_1642624A0A1W2PR95 340 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 PLA2G6O60733 806 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 CYP2C8P10632 490 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 NTRK3Q16288 839 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 HOMER1Q86YM7 354 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 ATG4CQ96DT6 458 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 SPZ1Q9BXG8 430 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 SLC45A1Q9Y2W3 748 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 CNTNAP5Q8WYK1 1306 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 SPDYE16A6NNV3 312 aaPredicted RBP16.41■□□□□ 0.22
RIPK3-206ENST00000557624 CDKL5O76039 1030 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 IFNAR1P17181 557 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 DSG3P32926 999 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 FUT2Q10981 343 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 OTUD7BQ6GQQ9 843 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 SMCR8Q8TEV9 937 aaPredicted RBP16.41■□□□□ 0.22
RIPK3-206ENST00000557624 P2RX7Q99572 595 aaKnown RBP16.41■□□□□ 0.22
RIPK3-206ENST00000557624 SLC26A6Q9BXS9 759 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 JMJD4Q9H9V9 463 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 HOXC10Q9NYD6 342 aa16.41■□□□□ 0.22
RIPK3-206ENST00000557624 PTPDC1A2A3K4 754 aa16.4■□□□□ 0.22
RIPK3-206ENST00000557624 JAK2O60674 1132 aa16.4■□□□□ 0.22
RIPK3-206ENST00000557624 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
RIPK3-206ENST00000557624 TM4SF4P48230 202 aa16.4■□□□□ 0.22
RIPK3-206ENST00000557624 HERVK_113P62684 666 aa16.4■□□□□ 0.22
RIPK3-206ENST00000557624 NSUN7Q8NE18 718 aaKnown RBP16.4■□□□□ 0.22
RIPK3-206ENST00000557624 RRP36Q96EU6 259 aaKnown RBP16.4■□□□□ 0.22
RIPK3-206ENST00000557624 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
RIPK3-206ENST00000557624 PIGSQ96S52 555 aa16.4■□□□□ 0.22
RIPK3-206ENST00000557624 PARK7Q99497 189 aaKnown RBP16.4■□□□□ 0.22
RIPK3-206ENST00000557624 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
RIPK3-206ENST00000557624 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
RIPK3-206ENST00000557624 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
RIPK3-206ENST00000557624 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
RIPK3-206ENST00000557624 COL11A1P12107 1806 aaPredicted RBP16.4■□□□□ 0.22
RIPK3-206ENST00000557624 MYPNQ86TC9 1320 aa16.39■□□□□ 0.21
RIPK3-206ENST00000557624 VWA5AO00534 786 aa16.39■□□□□ 0.21
RIPK3-206ENST00000557624 SMARCA1P28370 1054 aa16.39■□□□□ 0.21
RIPK3-206ENST00000557624 MAP2K2P36507 400 aa16.39■□□□□ 0.21
RIPK3-206ENST00000557624 AKAP17AQ02040 695 aaKnown RBP16.39■□□□□ 0.21
RIPK3-206ENST00000557624 SSRP1Q08945 709 aaKnown RBP16.39■□□□□ 0.21
RIPK3-206ENST00000557624 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
RIPK3-206ENST00000557624 CDC37Q16543 378 aaPredicted RBP16.39■□□□□ 0.21
RIPK3-206ENST00000557624 CCDC174Q6PII3 467 aa16.39■□□□□ 0.21
RIPK3-206ENST00000557624 TRIM22Q8IYM9 498 aa16.39■□□□□ 0.21
RIPK3-206ENST00000557624 SEC63Q9UGP8 760 aaKnown RBP16.39■□□□□ 0.21
RIPK3-206ENST00000557624 CUL4AQ13619 759 aa16.38■□□□□ 0.21
RIPK3-206ENST00000557624 SPRYD3Q8NCJ5 442 aa16.38■□□□□ 0.21
RIPK3-206ENST00000557624 LLPHQ9BRT6 129 aaKnown RBP16.38■□□□□ 0.21
RIPK3-206ENST00000557624 PAGR1Q9BTK6 254 aa16.38■□□□□ 0.21
RIPK3-206ENST00000557624 ZBTB5O15062 677 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 PEX10O60683 326 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 ZBED4O75132 1171 aa16.37■□□□□ 0.21
RIPK3-206ENST00000557624 FMNL1O95466 1100 aaPredicted RBP16.37■□□□□ 0.21
RIPK3-206ENST00000557624 SLC4A3P48751 1232 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms