RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 CNNM2Q9H8M5 875 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 SYNPO2Q9UMS6 1093 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 STX8Q9UNK0 236 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 SIPA1L1O43166 1804 aa9.83□□□□□ -0.84
PSEN1-223ENST00000557511 ATAD5Q96QE3 1844 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 A0A1W2PRG0 241 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 PPP1R3GB7ZBB8 358 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 SMIM22K7EJ46 135 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 TK2O00142 265 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 IKQ13123 557 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-223ENST00000557511 WDR78Q5VTH9 848 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 CLEC10AQ8IUN9 316 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 SPICE1Q8N0Z3 855 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 MB21D1Q8N884 522 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 STAG1Q8WVM7 1258 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 CEP95Q96GE4 821 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 KRT23Q9C075 422 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 MTMR4Q9NYA4 1195 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 BIN2Q9UBW5 565 aaPredicted RBP9.82□□□□□ -0.84
PSEN1-223ENST00000557511 PTPN22Q9Y2R2 807 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.82□□□□□ -0.84
PSEN1-223ENST00000557511 RABGAP1Q9Y3P9 1069 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 LAMB1P07942 1786 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 BAZ2AQ9UIF9 1905 aaKnown RBP9.82□□□□□ -0.84
PSEN1-223ENST00000557511 MYPNQ86TC9 1320 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 ADGRA2Q96PE1 1338 aa9.82□□□□□ -0.84
PSEN1-223ENST00000557511 PLIN4Q96Q06 1357 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 F5H6K3 240 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 CDC45O75419 566 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 MAPK4P31152 587 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 ERVK-9P63128 1117 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 ERVK-24P63145 666 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 KLRC3Q07444 240 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 TSR1Q2NL82 804 aaKnown RBP9.81□□□□□ -0.84
PSEN1-223ENST00000557511 SLC9C1Q4G0N8 1177 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 IFFO2Q5TF58 517 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 SLFN13Q68D06 897 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 RALYLQ86SE5 291 aaKnown RBP9.81□□□□□ -0.84
PSEN1-223ENST00000557511 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 MORF4L1Q9UBU8 362 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 SRRDQ9UH36 339 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 HPS5Q9UPZ3 1129 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 IVNS1ABPQ9Y6Y0 642 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 CASP8AP2Q9UKL3 1982 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 PCNTO95613 3336 aa9.81□□□□□ -0.84
PSEN1-223ENST00000557511 IGKV6D-41A0A0C4DH26 115 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 ERICH2A1L162 156 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 FOXP2O15409 715 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 SGSM2O43147 1006 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 ZBED4O75132 1171 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 COL9A1P20849 921 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 SLC1A4P43007 532 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 UBXN2AP68543 259 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 PLS1Q14651 629 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 FAM83BQ5T0W9 1011 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 LRRC47Q8N1G4 583 aaKnown RBP9.8□□□□□ -0.84
PSEN1-223ENST00000557511 GMCL1P1Q8NEA9 526 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 CHURC1Q8WUH1 139 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 MKL1Q969V6 931 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 TTC14Q96N46 770 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 UBAC1Q9BSL1 405 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 ARHGAP39Q9C0H5 1083 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 ANO2Q9NQ90 1003 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 FEM1BQ9UK73 627 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 MTMR7Q9Y216 660 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 VPS9D1Q9Y2B5 631 aa9.8□□□□□ -0.84
PSEN1-223ENST00000557511 LOC285556D6RIA3 1793 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
PSEN1-223ENST00000557511 NDUFB10O96000 172 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 FGRP09769 529 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 FDX1P10109 184 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 TOP1P11387 765 aaKnown RBP9.79□□□□□ -0.84
PSEN1-223ENST00000557511 BMP3P12645 472 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 COPB2P35606 906 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 SART3Q15020 963 aaKnown RBP9.79□□□□□ -0.84
PSEN1-223ENST00000557511 CCDC96Q2M329 555 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 LBX2Q6XYB7 198 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 PLEKHH3Q7Z736 793 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 FAM160B2Q86V87 743 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 SIAH1Q8IUQ4 282 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 TBC1D10CQ8IV04 446 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 SOCS4Q8WXH5 440 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 NUDT12Q9BQG2 462 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 ESYT1Q9BSJ8 1104 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 ZBED2Q9BTP6 218 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
PSEN1-223ENST00000557511 KAT14Q9H8E8 782 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 INCENPQ9NQS7 918 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 TCP11L1Q9NUJ3 509 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 SLC5A4Q9NY91 659 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 RBPJLQ9UBG7 517 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 PTCH2Q9Y6C5 1203 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 MYH8P13535 1937 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 PHIPQ8WWQ0 1821 aa9.79□□□□□ -0.84
PSEN1-223ENST00000557511 EIF5BO60841 1220 aaKnown RBP9.78□□□□□ -0.84
PSEN1-223ENST00000557511 KDM4AO75164 1064 aa9.78□□□□□ -0.84
PSEN1-223ENST00000557511 SLC25A27O95847 323 aa9.78□□□□□ -0.84
PSEN1-223ENST00000557511 GRK4P32298 578 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms