RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.74■□□□□ 0.43
SEC23A-214ENST00000557437 TCP11L1Q9NUJ3 509 aa17.74■□□□□ 0.43
SEC23A-214ENST00000557437 STX8Q9UNK0 236 aa17.74■□□□□ 0.43
SEC23A-214ENST00000557437 DIS3Q9Y2L1 958 aaKnown RBP17.74■□□□□ 0.43
SEC23A-214ENST00000557437 RIPK3Q9Y572 518 aa17.74■□□□□ 0.43
SEC23A-214ENST00000557437 FRMPD3Q5JV73 1810 aa17.73■□□□□ 0.43
SEC23A-214ENST00000557437 ALPK3Q96L96 1907 aa17.73■□□□□ 0.43
SEC23A-214ENST00000557437 HIP1O00291 1037 aa17.73■□□□□ 0.43
SEC23A-214ENST00000557437 RANBP6O60518 1105 aaKnown RBP17.73■□□□□ 0.43
SEC23A-214ENST00000557437 MSCO60682 206 aa17.73■□□□□ 0.43
SEC23A-214ENST00000557437 PLA2G6O60733 806 aa17.73■□□□□ 0.43
SEC23A-214ENST00000557437 PCP11498 1178 aaKnown RBP17.73■□□□□ 0.43
SEC23A-214ENST00000557437 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
SEC23A-214ENST00000557437 ZNF792Q3KQV3 632 aa17.73■□□□□ 0.43
SEC23A-214ENST00000557437 SNRNP48Q6IEG0 339 aaKnown RBP17.73■□□□□ 0.43
SEC23A-214ENST00000557437 MMP19Q99542 508 aa17.73■□□□□ 0.43
SEC23A-214ENST00000557437 DDX20Q9UHI6 824 aaKnown RBP17.73■□□□□ 0.43
SEC23A-214ENST00000557437 NR2E3Q9Y5X4 410 aa17.73■□□□□ 0.43
SEC23A-214ENST00000557437 PFASO15067 1338 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 ZNFX1Q9P2E3 1918 aaKnown RBP17.72■□□□□ 0.43
SEC23A-214ENST00000557437 ZBED4O75132 1171 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 FDX1P10109 184 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 OAZ1P54368 228 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 KCTD2Q14681 263 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 HABP4Q5JVS0 413 aaKnown RBP17.72■□□□□ 0.43
SEC23A-214ENST00000557437 CWC27Q6UX04 472 aaKnown RBP17.72■□□□□ 0.43
SEC23A-214ENST00000557437 STAG1Q8WVM7 1258 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 KIFC2Q96AC6 838 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 C11orf49Q9H6J7 331 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 DIAPH3Q9NSV4 1193 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 CEP290O15078 2479 aa17.72■□□□□ 0.43
SEC23A-214ENST00000557437 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
SEC23A-214ENST00000557437 DNAJC25-GNG10A0A024R161 153 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 TMEM232C9JQI7 657 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 PGK2P07205 417 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 GSPT1P15170 499 aaKnown RBP17.71■□□□□ 0.43
SEC23A-214ENST00000557437 MCCP23508 829 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 SLC1A4P43007 532 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 STAT2P52630 851 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 HAND2P61296 217 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 AKNAD1Q5T1N1 836 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 RCSD1Q6JBY9 416 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 FAM160B2Q86V87 743 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 TBC1D10CQ8IV04 446 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 NRBP1Q9UHY1 535 aa17.71■□□□□ 0.43
SEC23A-214ENST00000557437 COLQQ9Y215 455 aaPredicted RBP17.71■□□□□ 0.43
SEC23A-214ENST00000557437 SEPT4O43236 478 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 EVI5O60447 810 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 TTC22Q5TAA0 569 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 CPXCR1Q8N123 301 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 CHURC1Q8WUH1 139 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 TINF2Q9BSI4 451 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 PRO3102Q9H379 93 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 RAVER2Q9HCJ3 691 aaKnown RBP17.7■□□□□ 0.42
SEC23A-214ENST00000557437 ZNF536O15090 1300 aa17.7■□□□□ 0.42
SEC23A-214ENST00000557437 CNGA1P29973 690 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 NT5C2P49902 561 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
SEC23A-214ENST00000557437 PRAMEF19Q5SWL8 479 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 MFSD6Q6ZSS7 791 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 KCTD1Q719H9 257 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 RASGRP2Q7LDG7 609 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 IL25Q9H293 177 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 TOMM22Q9NS69 142 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 LAMA4Q16363 1823 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 PLXNA1Q9UIW2 1896 aa17.69■□□□□ 0.42
SEC23A-214ENST00000557437 ZNF213O14771 459 aa17.68■□□□□ 0.42
SEC23A-214ENST00000557437 TOP1P11387 765 aaKnown RBP17.68■□□□□ 0.42
SEC23A-214ENST00000557437 MAMDC4Q6UXC1 1216 aa17.68■□□□□ 0.42
SEC23A-214ENST00000557437 MSL3Q8N5Y2 521 aaKnown RBP17.68■□□□□ 0.42
SEC23A-214ENST00000557437 CHST13Q8NET6 341 aa17.68■□□□□ 0.42
SEC23A-214ENST00000557437 DCAF4Q8WV16 495 aa17.68■□□□□ 0.42
SEC23A-214ENST00000557437 TTC14Q96N46 770 aa17.68■□□□□ 0.42
SEC23A-214ENST00000557437 RNF41Q9H4P4 317 aaPredicted RBP17.68■□□□□ 0.42
SEC23A-214ENST00000557437 FBXO40Q9UH90 709 aa17.68■□□□□ 0.42
SEC23A-214ENST00000557437 CTDP1Q9Y5B0 961 aaPredicted RBP17.68■□□□□ 0.42
SEC23A-214ENST00000557437 DNM1LO00429 736 aa17.67■□□□□ 0.42
SEC23A-214ENST00000557437 BTNL9Q6UXG8 535 aa17.67■□□□□ 0.42
SEC23A-214ENST00000557437 ZNF467Q7Z7K2 595 aaPredicted RBP17.67■□□□□ 0.42
SEC23A-214ENST00000557437 PRR12Q9ULL5 1215 aa17.67■□□□□ 0.42
SEC23A-214ENST00000557437 NEDD4P46934 1319 aa17.67■□□□□ 0.42
SEC23A-214ENST00000557437 ZNF865P0CJ78 1059 aaPredicted RBP17.66■□□□□ 0.42
SEC23A-214ENST00000557437 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
SEC23A-214ENST00000557437 ESR2Q92731 530 aa17.66■□□□□ 0.42
SEC23A-214ENST00000557437 DDX11Q96FC9 970 aa17.66■□□□□ 0.42
SEC23A-214ENST00000557437 FGD4Q96M96 766 aa17.66■□□□□ 0.42
SEC23A-214ENST00000557437 DNAH12Q6ZR08 3092 aa17.66■□□□□ 0.42
SEC23A-214ENST00000557437 SYNGAP1Q96PV0 1343 aa17.66■□□□□ 0.42
SEC23A-214ENST00000557437 SNHG28P0DPA3 235 aa17.65■□□□□ 0.42
SEC23A-214ENST00000557437 TAL1P17542 331 aaPredicted RBP17.65■□□□□ 0.42
SEC23A-214ENST00000557437 TKFCQ3LXA3 575 aa17.65■□□□□ 0.42
SEC23A-214ENST00000557437 ARRDC4Q8NCT1 418 aa17.65■□□□□ 0.42
SEC23A-214ENST00000557437 CHMP4CQ96CF2 233 aa17.65■□□□□ 0.42
SEC23A-214ENST00000557437 AGBL1Q96MI9 1066 aa17.65■□□□□ 0.42
SEC23A-214ENST00000557437 RAD50Q92878 1312 aa17.65■□□□□ 0.42
SEC23A-214ENST00000557437 SNAI1O95863 264 aaPredicted RBP17.64■□□□□ 0.41
SEC23A-214ENST00000557437 PDHBP11177 359 aa17.64■□□□□ 0.41
SEC23A-214ENST00000557437 SLC4A3P48751 1232 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms