RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GSG1L2A8MUP6 293 aa16.89■□□□□ 0.29
SLIRP-210ENST00000557431 ADCY6O43306 1168 aa16.89■□□□□ 0.29
SLIRP-210ENST00000557431 ADAMTS4O75173 837 aa16.89■□□□□ 0.29
SLIRP-210ENST00000557431 NDUFB10O96000 172 aa16.89■□□□□ 0.29
SLIRP-210ENST00000557431 DIEXFQ68CQ4 756 aaKnown RBP16.89■□□□□ 0.29
SLIRP-210ENST00000557431 RNF180Q86T96 592 aa16.89■□□□□ 0.29
SLIRP-210ENST00000557431 OSBP2Q969R2 916 aa16.89■□□□□ 0.29
SLIRP-210ENST00000557431 STRBPQ96SI9 672 aaKnown RBP16.89■□□□□ 0.29
SLIRP-210ENST00000557431 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
SLIRP-210ENST00000557431 RAVER2Q9HCJ3 691 aaKnown RBP16.89■□□□□ 0.29
SLIRP-210ENST00000557431 ARPP21Q9UBL0 812 aaPredicted RBP16.89■□□□□ 0.29
SLIRP-210ENST00000557431 ZHX1Q9UKY1 873 aaPredicted RBP16.89■□□□□ 0.29
SLIRP-210ENST00000557431 SYNRGQ9UMZ2 1314 aa16.89■□□□□ 0.29
SLIRP-210ENST00000557431 F5H6K3 240 aa16.88■□□□□ 0.29
SLIRP-210ENST00000557431 M0R2C6 588 aa16.88■□□□□ 0.29
SLIRP-210ENST00000557431 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
SLIRP-210ENST00000557431 AKR1A1P14550 325 aa16.88■□□□□ 0.29
SLIRP-210ENST00000557431 KLRC3Q07444 240 aa16.88■□□□□ 0.29
SLIRP-210ENST00000557431 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
SLIRP-210ENST00000557431 MAFAQ8NHW3 353 aaPredicted RBP16.88■□□□□ 0.29
SLIRP-210ENST00000557431 RNPC3Q96LT9 517 aaKnown RBP16.88■□□□□ 0.29
SLIRP-210ENST00000557431 ROBO3Q96MS0 1386 aa16.88■□□□□ 0.29
SLIRP-210ENST00000557431 RAG1P15918 1043 aa16.87■□□□□ 0.29
SLIRP-210ENST00000557431 C1orf53Q5VUE5 145 aa16.87■□□□□ 0.29
SLIRP-210ENST00000557431 ZSCAN25Q6NSZ9 544 aa16.87■□□□□ 0.29
SLIRP-210ENST00000557431 KIFC2Q96AC6 838 aa16.87■□□□□ 0.29
SLIRP-210ENST00000557431 DDX11Q96FC9 970 aa16.87■□□□□ 0.29
SLIRP-210ENST00000557431 MKNK2Q9HBH9 465 aa16.87■□□□□ 0.29
SLIRP-210ENST00000557431 CLIP2Q9UDT6 1046 aa16.87■□□□□ 0.29
SLIRP-210ENST00000557431 SCN5AQ14524 2016 aa16.87■□□□□ 0.29
SLIRP-210ENST00000557431 GPAA1O43292 621 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 PTGS1P23219 599 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 FAAP100Q0VG06 881 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 FGD4Q96M96 766 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 TEX13BQ9BXU2 312 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 STARD7Q9NQZ5 370 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 TMEM39AQ9NV64 488 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 CNPY2Q9Y2B0 182 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 DIS3Q9Y2L1 958 aaKnown RBP16.86■□□□□ 0.29
SLIRP-210ENST00000557431 TACC3Q9Y6A5 838 aa16.86■□□□□ 0.29
SLIRP-210ENST00000557431 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
SLIRP-210ENST00000557431 PRUNE2Q8WUY3 3088 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 KIAA0355O15063 1070 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 ACLYP53396 1101 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 SMAD3P84022 425 aaKnown RBP16.85■□□□□ 0.29
SLIRP-210ENST00000557431 KCNA10Q16322 511 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 SBK1Q52WX2 424 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 KBTBD3Q8NAB2 608 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 CEP95Q96GE4 821 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 SEC62Q99442 399 aaKnown RBP16.85■□□□□ 0.29
SLIRP-210ENST00000557431 HOMER2Q9NSB8 354 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 ECHDC1Q9NTX5 307 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 NYAP2Q9P242 653 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 NRBP1Q9UHY1 535 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 RCAN3Q9UKA8 241 aa16.85■□□□□ 0.29
SLIRP-210ENST00000557431 ISY1Q9ULR0 285 aaKnown RBP16.85■□□□□ 0.29
SLIRP-210ENST00000557431 DNAJC25-GNG10A0A024R161 153 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 FOSL2P15408 326 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 TDO2P48775 406 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 FPGSQ05932 587 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 RASGRP2Q7LDG7 609 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 KLHDC9Q8NEP7 349 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 APPBP2Q92624 585 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.84■□□□□ 0.29
SLIRP-210ENST00000557431 FAM184BQ9ULE4 1060 aa16.84■□□□□ 0.29
SLIRP-210ENST00000557431 TCF20Q9UGU0 1960 aaKnown RBP16.84■□□□□ 0.29
SLIRP-210ENST00000557431 RNF113AO15541 343 aaKnown RBP16.83■□□□□ 0.28
SLIRP-210ENST00000557431 APPP05067 770 aa16.83■□□□□ 0.28
SLIRP-210ENST00000557431 C6orf222P0C671 652 aaPredicted RBP16.83■□□□□ 0.28
SLIRP-210ENST00000557431 COPB2P35606 906 aa16.83■□□□□ 0.28
SLIRP-210ENST00000557431 CCSAPQ6IQ19 270 aaPredicted RBP16.83■□□□□ 0.28
SLIRP-210ENST00000557431 PRPF38AQ8NAV1 312 aaKnown RBP16.83■□□□□ 0.28
SLIRP-210ENST00000557431 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.83■□□□□ 0.286e-7■■■□□ 18.5
SLIRP-210ENST00000557431 PPP1R12CQ9BZL4 782 aa16.83■□□□□ 0.28
SLIRP-210ENST00000557431 CTDP1Q9Y5B0 961 aaPredicted RBP16.83■□□□□ 0.28
SLIRP-210ENST00000557431 MYH6P13533 1939 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 VCANP13611 3396 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 SYNGAP1Q96PV0 1343 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.82■□□□□ 0.28
SLIRP-210ENST00000557431 GRXCR1A8MXD5 290 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 ZBED4O75132 1171 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 SNAP25P60880 206 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 BEX3Q00994 111 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 CNTN2Q02246 1040 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 ACVR2BQ13705 512 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 GRIN2CQ14957 1233 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 CCDC144BQ3MJ40 725 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 ANKRD35Q8N283 1001 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 USP38Q8NB14 1042 aa16.82■□□□□ 0.28
SLIRP-210ENST00000557431 OTUD7AQ8TE49 926 aaPredicted RBP16.82■□□□□ 0.28
SLIRP-210ENST00000557431 TRIP12Q14669 1992 aaPredicted RBP16.81■□□□□ 0.28
SLIRP-210ENST00000557431 DCDC2CA8MYV0 355 aa16.81■□□□□ 0.28
SLIRP-210ENST00000557431 ASGR1P07306 291 aa16.81■□□□□ 0.28
SLIRP-210ENST00000557431 ACRP10323 421 aa16.81■□□□□ 0.28
SLIRP-210ENST00000557431 MAMDC4Q6UXC1 1216 aa16.81■□□□□ 0.28
SLIRP-210ENST00000557431 ARMCX2Q7L311 632 aa16.81■□□□□ 0.28
SLIRP-210ENST00000557431 IFNL3Q8IZI9 196 aa16.81■□□□□ 0.28
SLIRP-210ENST00000557431 ZNF444Q8N0Y2 327 aaPredicted RBP16.81■□□□□ 0.28
SLIRP-210ENST00000557431 VTI1AQ96AJ9 217 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms