RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 NBPF3Q9H094 633 aa19.57■□□□□ 0.72
VSX1-207ENST00000557285 RAVER2Q9HCJ3 691 aaKnown RBP19.57■□□□□ 0.72
VSX1-207ENST00000557285 TMEM232C9JQI7 657 aa19.56■□□□□ 0.72
VSX1-207ENST00000557285 ZBED4O75132 1171 aa19.56■□□□□ 0.72
VSX1-207ENST00000557285 HOXC6P09630 235 aa19.56■□□□□ 0.72
VSX1-207ENST00000557285 MFSD6Q6ZSS7 791 aa19.56■□□□□ 0.72
VSX1-207ENST00000557285 KCTD1Q719H9 257 aa19.56■□□□□ 0.72
VSX1-207ENST00000557285 LAMA4Q16363 1823 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 ZMYM6O95789 1325 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 H0YGN5 161 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 ZNF213O14771 459 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 KCTD2Q14681 263 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 CCDC96Q2M329 555 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 PPP4R3BQ5MIZ7 849 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 AKNAD1Q5T1N1 836 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 TEX13BQ9BXU2 312 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 SLC5A4Q9NY91 659 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 PLXNA1Q9UIW2 1896 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 SYNPO2Q9UMS6 1093 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 RIPK3Q9Y572 518 aa19.55■□□□□ 0.72
VSX1-207ENST00000557285 FRMPD3Q5JV73 1810 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 STAT2P52630 851 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 SNAP25P60880 206 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 PRAMEF19Q5SWL8 479 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 NECAB2Q7Z6G3 386 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 ABRAQ8N0Z2 381 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 TRPV1Q8NER1 839 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 STAG1Q8WVM7 1258 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 HOMER2Q9NSB8 354 aa19.54■□□□□ 0.72
VSX1-207ENST00000557285 NEDD4P46934 1319 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 FGRP09769 529 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 ANO1Q5XXA6 986 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 GMCL1Q96IK5 515 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 MAML3Q96JK9 1138 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 ZKSCAN3Q9BRR0 538 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 IL25Q9H293 177 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 SLC38A10Q9HBR0 1119 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 OGDHLQ9ULD0 1010 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 CEP290O15078 2479 aa19.53■□□□□ 0.72
VSX1-207ENST00000557285 MYCNP04198 464 aaPredicted RBP19.52■□□□□ 0.72
VSX1-207ENST00000557285 COPB2P35606 906 aa19.52■□□□□ 0.72
VSX1-207ENST00000557285 OLFML2BQ68BL8 750 aa19.52■□□□□ 0.72
VSX1-207ENST00000557285 LHX8Q68G74 356 aa19.52■□□□□ 0.72
VSX1-207ENST00000557285 CCDC174Q6PII3 467 aa19.52■□□□□ 0.72
VSX1-207ENST00000557285 ANKLE1Q8NAG6 615 aa19.52■□□□□ 0.72
VSX1-207ENST00000557285 CHURC1Q8WUH1 139 aa19.52■□□□□ 0.72
VSX1-207ENST00000557285 TMEM47Q9BQJ4 181 aa19.52■□□□□ 0.72
VSX1-207ENST00000557285 RNF41Q9H4P4 317 aaPredicted RBP19.52■□□□□ 0.72
VSX1-207ENST00000557285 C11orf49Q9H6J7 331 aa19.52■□□□□ 0.72
VSX1-207ENST00000557285 FRMPD2Q68DX3 1309 aaPredicted RBP19.51■□□□□ 0.71
VSX1-207ENST00000557285 ALPK3Q96L96 1907 aa19.51■□□□□ 0.71
VSX1-207ENST00000557285 EVI5O60447 810 aa19.51■□□□□ 0.71
VSX1-207ENST00000557285 CYBAP13498 195 aa19.51■□□□□ 0.71
VSX1-207ENST00000557285 FAM160B2Q86V87 743 aa19.51■□□□□ 0.71
VSX1-207ENST00000557285 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
VSX1-207ENST00000557285 GPCPD1Q9NPB8 672 aa19.51■□□□□ 0.71
VSX1-207ENST00000557285 DDX20Q9UHI6 824 aaKnown RBP19.51■□□□□ 0.71
VSX1-207ENST00000557285 TOP1P11387 765 aaKnown RBP19.5■□□□□ 0.71
VSX1-207ENST00000557285 SLC16A2P36021 539 aa19.5■□□□□ 0.71
VSX1-207ENST00000557285 MNX1P50219 401 aaPredicted RBP19.5■□□□□ 0.71
VSX1-207ENST00000557285 IMMTQ16891 758 aaKnown RBP19.5■□□□□ 0.71
VSX1-207ENST00000557285 RCSD1Q6JBY9 416 aa19.5■□□□□ 0.71
VSX1-207ENST00000557285 ESR2Q92731 530 aa19.5■□□□□ 0.71
VSX1-207ENST00000557285 DSCC1Q9BVC3 393 aa19.5■□□□□ 0.71
VSX1-207ENST00000557285 B4E1Z4 1266 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 KDM4AO75164 1064 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 PCP11498 1178 aaKnown RBP19.49■□□□□ 0.71
VSX1-207ENST00000557285 TAL1P17542 331 aaPredicted RBP19.49■□□□□ 0.71
VSX1-207ENST00000557285 CAPN2P17655 700 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 TTBK2Q6IQ55 1244 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 C7orf61Q8IZ16 206 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 ANKRD35Q8N283 1001 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 DCAF4Q8WV16 495 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 AGBL1Q96MI9 1066 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 CTNNA3Q9UI47 895 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 PRR12Q9ULL5 1215 aa19.49■□□□□ 0.71
VSX1-207ENST00000557285 ATP2A1O14983 1001 aa19.48■□□□□ 0.71
VSX1-207ENST00000557285 CHMLP26374 656 aa19.48■□□□□ 0.71
VSX1-207ENST00000557285 ZNF792Q3KQV3 632 aa19.48■□□□□ 0.71
VSX1-207ENST00000557285 SKAP1Q86WV1 359 aa19.48■□□□□ 0.71
VSX1-207ENST00000557285 TCP11L1Q9NUJ3 509 aa19.48■□□□□ 0.71
VSX1-207ENST00000557285 NR2E3Q9Y5X4 410 aa19.48■□□□□ 0.71
VSX1-207ENST00000557285 MSCO60682 206 aa19.47■□□□□ 0.71
VSX1-207ENST00000557285 IGHA2P01877 340 aa19.47■□□□□ 0.71
VSX1-207ENST00000557285 ALAS1P13196 640 aa19.47■□□□□ 0.71
VSX1-207ENST00000557285 NOVP48745 357 aa19.47■□□□□ 0.71
VSX1-207ENST00000557285 OAZ1P54368 228 aa19.47■□□□□ 0.71
VSX1-207ENST00000557285 RUFY2Q8WXA3 655 aa19.47■□□□□ 0.71
VSX1-207ENST00000557285 RNF146Q9NTX7 359 aa19.47■□□□□ 0.71
VSX1-207ENST00000557285 PFASO15067 1338 aa19.47■□□□□ 0.71
VSX1-207ENST00000557285 GJC2Q5T442 439 aaPredicted RBP19.46■□□□□ 0.71
VSX1-207ENST00000557285 CHRDL2Q6WN34 429 aa19.46■□□□□ 0.71
VSX1-207ENST00000557285 CHST13Q8NET6 341 aa19.46■□□□□ 0.71
VSX1-207ENST00000557285 TINF2Q9BSI4 451 aa19.46■□□□□ 0.71
VSX1-207ENST00000557285 FBXO40Q9UH90 709 aa19.46■□□□□ 0.71
VSX1-207ENST00000557285 COLQQ9Y215 455 aaPredicted RBP19.46■□□□□ 0.71
VSX1-207ENST00000557285 MCM3APO60318 1980 aa19.46■□□□□ 0.71
VSX1-207ENST00000557285 ZNF536O15090 1300 aa19.46■□□□□ 0.71
VSX1-207ENST00000557285 RAD50Q92878 1312 aa19.46■□□□□ 0.71
VSX1-207ENST00000557285 SMCHD1A6NHR9 2005 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms