RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 SNAI1O95863 264 aaPredicted RBP14.78□□□□□ -0.04
SNX6-209ENST00000557265 ATP5JP18859 108 aa14.78□□□□□ -0.04
SNX6-209ENST00000557265 SNRNP48Q6IEG0 339 aaKnown RBP14.78□□□□□ -0.04
SNX6-209ENST00000557265 CCSAPQ6IQ19 270 aaPredicted RBP14.78□□□□□ -0.04
SNX6-209ENST00000557265 SLF1Q9BQI6 1058 aa14.78□□□□□ -0.04
SNX6-209ENST00000557265 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.78□□□□□ -0.042e-8■□□□□ 10.7
SNX6-209ENST00000557265 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX6-209ENST00000557265 TEX13BQ9BXU2 312 aa14.78□□□□□ -0.04
SNX6-209ENST00000557265 TBX21Q9UL17 535 aa14.78□□□□□ -0.04
SNX6-209ENST00000557265 PRUNE2Q8WUY3 3088 aa14.78□□□□□ -0.04
SNX6-209ENST00000557265 SYNGAP1Q96PV0 1343 aa14.77□□□□□ -0.04
SNX6-209ENST00000557265 MYADML2A6NDP7 307 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 DUSP11O75319 330 aaKnown RBP14.77□□□□□ -0.05
SNX6-209ENST00000557265 SLC4A3P48751 1232 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 IRX5P78411 483 aaPredicted RBP14.77□□□□□ -0.05
SNX6-209ENST00000557265 UBE3CQ15386 1083 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 TJAP1Q5JTD0 557 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 MFSD5Q6N075 450 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 MAMDC4Q6UXC1 1216 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 C16orf59Q7L2K0 433 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 SIRT2Q8IXJ6 389 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 VTI1AQ96AJ9 217 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 GLT1D1Q96MS3 346 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 HAUS7Q99871 368 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 RIPK3Q9Y572 518 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 NAV1Q8NEY1 1877 aa14.77□□□□□ -0.05
SNX6-209ENST00000557265 ELP1O95163 1332 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 ZBED9Q6R2W3 1325 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 DNAJC25-GNG10A0A024R161 153 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 F5H6K3 240 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 RAB11FIP3O75154 756 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 HMMRO75330 724 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 C6orf222P0C671 652 aaPredicted RBP14.76□□□□□ -0.05
SNX6-209ENST00000557265 CDK7P50613 346 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 KLRC3Q07444 240 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 ACVR2BQ13705 512 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 RPAP2Q8IXW5 612 aaPredicted RBP14.76□□□□□ -0.05
SNX6-209ENST00000557265 CPXCR1Q8N123 301 aa14.76□□□□□ -0.05
SNX6-209ENST00000557265 PUS7LQ9H0K6 701 aaKnown RBP14.76□□□□□ -0.05
SNX6-209ENST00000557265 GRXCR1A8MXD5 290 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 ZBED4O75132 1171 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 NDUFB10O96000 172 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 ASGR1P07306 291 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 CSF2RAP15509 400 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 CST5P28325 142 aaPredicted RBP14.75□□□□□ -0.05
SNX6-209ENST00000557265 PBX2P40425 430 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 HNRNPUQ00839 825 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNX6-209ENST00000557265 PPIGQ13427 754 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNX6-209ENST00000557265 TMEM240Q5SV17 173 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 CCDC174Q6PII3 467 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 CCDC129Q6ZRS4 1044 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 ZNF467Q7Z7K2 595 aaPredicted RBP14.75□□□□□ -0.05
SNX6-209ENST00000557265 STK11IPQ8N1F8 1099 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 PRPF38AQ8NAV1 312 aaKnown RBP14.75□□□□□ -0.05
SNX6-209ENST00000557265 PCSK9Q8NBP7 692 aaKnown RBP14.75□□□□□ -0.05
SNX6-209ENST00000557265 PPM1EQ8WY54 764 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.75□□□□□ -0.05
SNX6-209ENST00000557265 ARPP21Q9UBL0 812 aaPredicted RBP14.75□□□□□ -0.05
SNX6-209ENST00000557265 SMCHD1A6NHR9 2005 aa14.75□□□□□ -0.05
SNX6-209ENST00000557265 MROH7Q68CQ1 1323 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 TNFRSF10AO00220 468 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 ATP2A1O14983 1001 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 ADCY6O43306 1168 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 ACRP10323 421 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 RASA1P20936 1047 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 CCDC144BQ3MJ40 725 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 GNASQ5JWF2 1037 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 RASIP1Q5U651 963 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 ZSCAN25Q6NSZ9 544 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 ZNF365Q70YC5 407 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 ANKRD35Q8N283 1001 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 TMEM199Q8N511 208 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 GAS2L1Q99501 681 aaPredicted RBP14.74□□□□□ -0.05
SNX6-209ENST00000557265 PBX4Q9BYU1 374 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 ABHD16BQ9H3Z7 469 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 MKNK2Q9HBH9 465 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 SPC25Q9HBM1 224 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 RAVER2Q9HCJ3 691 aaKnown RBP14.74□□□□□ -0.05
SNX6-209ENST00000557265 NYAP2Q9P242 653 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 CLIP2Q9UDT6 1046 aa14.74□□□□□ -0.05
SNX6-209ENST00000557265 CTDP1Q9Y5B0 961 aaPredicted RBP14.74□□□□□ -0.05
SNX6-209ENST00000557265 A0A0U1RQG5 324 aaPredicted RBP14.73□□□□□ -0.05
SNX6-209ENST00000557265 ARVCFO00192 962 aa14.73□□□□□ -0.05
SNX6-209ENST00000557265 GJA9P57773 515 aa14.73□□□□□ -0.05
SNX6-209ENST00000557265 KIFC2Q96AC6 838 aa14.73□□□□□ -0.05
SNX6-209ENST00000557265 STRBPQ96SI9 672 aaKnown RBP14.73□□□□□ -0.05
SNX6-209ENST00000557265 PPP1R12CQ9BZL4 782 aa14.73□□□□□ -0.05
SNX6-209ENST00000557265 UPF3AQ9H1J1 476 aaKnown RBP14.73□□□□□ -0.05
SNX6-209ENST00000557265 PRDM12Q9H4Q4 367 aa14.73□□□□□ -0.05
SNX6-209ENST00000557265 MINDY4BA8MYZ0 360 aa14.72□□□□□ -0.05
SNX6-209ENST00000557265 SBK1Q52WX2 424 aa14.72□□□□□ -0.05
SNX6-209ENST00000557265 PSRC1Q6PGN9 363 aaPredicted RBP14.72□□□□□ -0.05
SNX6-209ENST00000557265 ARMCX2Q7L311 632 aa14.72□□□□□ -0.05
SNX6-209ENST00000557265 FAM126BQ8IXS8 530 aa14.72□□□□□ -0.05
SNX6-209ENST00000557265 FGD4Q96M96 766 aa14.72□□□□□ -0.05
SNX6-209ENST00000557265 SLC38A10Q9HBR0 1119 aa14.72□□□□□ -0.05
SNX6-209ENST00000557265 ZBTB40Q9NUA8 1239 aa14.72□□□□□ -0.05
SNX6-209ENST00000557265 GSG1L2A8MUP6 293 aa14.71□□□□□ -0.05
SNX6-209ENST00000557265 TLR3O15455 904 aaKnown RBP14.71□□□□□ -0.05
SNX6-209ENST00000557265 MS4A1P11836 297 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms