RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 ADAMTS5Q9UNA0 930 aa14.08□□□□□ -0.16
SYNE2-226ENST00000557084 TMEM232C9JQI7 657 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 HOXC6P09630 235 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 FGRP09769 529 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 GSPT1P15170 499 aaKnown RBP14.07□□□□□ -0.16
SYNE2-226ENST00000557084 STAT2P52630 851 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 CACNB2Q08289 660 aaPredicted RBP14.07□□□□□ -0.16
SYNE2-226ENST00000557084 SNRNP48Q6IEG0 339 aaKnown RBP14.07□□□□□ -0.16
SYNE2-226ENST00000557084 RIOX2Q8IUF8 465 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 ABRAQ8N0Z2 381 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 CPXCR1Q8N123 301 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 ESR2Q92731 530 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 GMCL1Q96IK5 515 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 DSCC1Q9BVC3 393 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 IL17RBQ9NRM6 502 aa14.07□□□□□ -0.16
SYNE2-226ENST00000557084 CNGA1P29973 690 aa14.06□□□□□ -0.16
SYNE2-226ENST00000557084 CCDC96Q2M329 555 aa14.06□□□□□ -0.16
SYNE2-226ENST00000557084 PRPF38BQ5VTL8 546 aaKnown RBP14.06□□□□□ -0.16
SYNE2-226ENST00000557084 FAM160B2Q86V87 743 aa14.06□□□□□ -0.16
SYNE2-226ENST00000557084 TBC1D10CQ8IV04 446 aa14.06□□□□□ -0.16
SYNE2-226ENST00000557084 STAG1Q8WVM7 1258 aa14.06□□□□□ -0.16
SYNE2-226ENST00000557084 DPF3Q92784 378 aa14.06□□□□□ -0.16
SYNE2-226ENST00000557084 HTATIP2Q9BUP3 242 aa14.06□□□□□ -0.16
SYNE2-226ENST00000557084 RBBP6Q7Z6E9 1792 aaKnown RBP14.06□□□□□ -0.16
SYNE2-226ENST00000557084 FDX1P10109 184 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 TOP1P11387 765 aaKnown RBP14.05□□□□□ -0.16
SYNE2-226ENST00000557084 MAP3K21Q5TCX8 1036 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 RCSD1Q6JBY9 416 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 KCTD1Q719H9 257 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 CENPQQ7L2Z9 268 aaPredicted RBP14.05□□□□□ -0.16
SYNE2-226ENST00000557084 IQCA1Q86XH1 822 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 NPLOC4Q8TAT6 608 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 DCAF4Q8WV16 495 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 DDX11Q96FC9 970 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 SLC38A10Q9HBR0 1119 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 RAVER2Q9HCJ3 691 aaKnown RBP14.05□□□□□ -0.16
SYNE2-226ENST00000557084 TCP11L1Q9NUJ3 509 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 ZNF214Q9UL59 606 aaPredicted RBP14.05□□□□□ -0.16
SYNE2-226ENST00000557084 TACC3Q9Y6A5 838 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 RAD50Q92878 1312 aa14.05□□□□□ -0.16
SYNE2-226ENST00000557084 GREB1LQ9C091 1923 aaPredicted RBP14.05□□□□□ -0.16
SYNE2-226ENST00000557084 COBLO75128 1261 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 NEFLP07196 543 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 CHMLP26374 656 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 CYP2C19P33261 490 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 NT5C2P49902 561 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 CCDC178Q5BJE1 867 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 OLFML2BQ68BL8 750 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 REPS2Q8NFH8 660 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 TTC14Q96N46 770 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 TMEM47Q9BQJ4 181 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 NBPF3Q9H094 633 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 CRISPLD2Q9H0B8 497 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 CNNM2Q9H8M5 875 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 FLRT1Q9NZU1 646 aa14.04□□□□□ -0.16
SYNE2-226ENST00000557084 ATP2A1O14983 1001 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 KDM4AO75164 1064 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 PGK2P07205 417 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 CCND3P30281 292 aaPredicted RBP14.03□□□□□ -0.16
SYNE2-226ENST00000557084 OAZ1P54368 228 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 NECAB2Q7Z6G3 386 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 ANKRD35Q8N283 1001 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 ANKLE1Q8NAG6 615 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 KRT23Q9C075 422 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 HOMER2Q9NSB8 354 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 FBXO40Q9UH90 709 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 NEDD4P46934 1319 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
SYNE2-226ENST00000557084 RLFQ13129 1914 aa14.02□□□□□ -0.16
SYNE2-226ENST00000557084 MSCO60682 206 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 PLA2G6O60733 806 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 TRDNQ13061 729 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 CCDC174Q6PII3 467 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 KIAA1211Q6ZU35 1233 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 PAWRQ96IZ0 340 aaKnown RBP14.02□□□□□ -0.17
SYNE2-226ENST00000557084 CCDC136Q96JN2 1154 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 ZKSCAN3Q9BRR0 538 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 UBAC1Q9BSL1 405 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 GPCPD1Q9NPB8 672 aa14.02□□□□□ -0.17
SYNE2-226ENST00000557084 PLXNB2O15031 1838 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 B4E1Z4 1266 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 CHST13Q8NET6 341 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 MAML3Q96JK9 1138 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 KAT14Q9H8E8 782 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 DDX20Q9UHI6 824 aaKnown RBP14.01□□□□□ -0.17
SYNE2-226ENST00000557084 OGDHLQ9ULD0 1010 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 PRR12Q9ULL5 1215 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 CNPY2Q9Y2B0 182 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 RIPK3Q9Y572 518 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 NR2E3Q9Y5X4 410 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 A0A0G2JMZ2 1700 aa14.01□□□□□ -0.17
SYNE2-226ENST00000557084 FRMPD2Q68DX3 1309 aaPredicted RBP14□□□□□ -0.17
SYNE2-226ENST00000557084 EVI5O60447 810 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 SLC16A2P36021 539 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 NOVP48745 357 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 SNAP25P60880 206 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 TKFCQ3LXA3 575 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 SYDE2Q5VT97 1194 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 UBE2Q1Q7Z7E8 422 aa14□□□□□ -0.17
SYNE2-226ENST00000557084 DGKHQ86XP1 1220 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms