RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 A0A1W2PQY0 241 aa17.68■□□□□ 0.42
CHD8-211ENST00000556833 ZNF865P0CJ78 1059 aaPredicted RBP17.68■□□□□ 0.42
CHD8-211ENST00000556833 SNX17Q15036 470 aa17.68■□□□□ 0.42
CHD8-211ENST00000556833 DDX11Q96FC9 970 aa17.68■□□□□ 0.42
CHD8-211ENST00000556833 CHMP4BQ9H444 224 aaKnown RBP17.68■□□□□ 0.42
CHD8-211ENST00000556833 RAVER2Q9HCJ3 691 aaKnown RBP17.68■□□□□ 0.42
CHD8-211ENST00000556833 PHF24Q9UPV7 400 aa17.68■□□□□ 0.42
CHD8-211ENST00000556833 CTDP1Q9Y5B0 961 aaPredicted RBP17.68■□□□□ 0.42
CHD8-211ENST00000556833 F5H6K3 240 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 GPAA1O43292 621 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 AKR1A1P14550 325 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 KLRC3Q07444 240 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 RNF180Q86T96 592 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 KBTBD3Q8NAB2 608 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 APPBP2Q92624 585 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 HOMER2Q9NSB8 354 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 CNPY2Q9Y2B0 182 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 SYNRGQ9UMZ2 1314 aa17.67■□□□□ 0.42
CHD8-211ENST00000556833 MYADML2A6NDP7 307 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 RNF113AO15541 343 aaKnown RBP17.66■□□□□ 0.42
CHD8-211ENST00000556833 CLTBP09497 229 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 EPHB4P54760 987 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 CEP95Q96GE4 821 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 SEC62Q99442 399 aaKnown RBP17.66■□□□□ 0.42
CHD8-211ENST00000556833 TEX13BQ9BXU2 312 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 CDH23Q9H251 3354 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 ROBO3Q96MS0 1386 aa17.66■□□□□ 0.42
CHD8-211ENST00000556833 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.65■□□□□ 0.42
CHD8-211ENST00000556833 MYLIPQ8WY64 445 aa17.65■□□□□ 0.42
CHD8-211ENST00000556833 CDX2Q99626 313 aaPredicted RBP17.65■□□□□ 0.42
CHD8-211ENST00000556833 NYAP2Q9P242 653 aa17.65■□□□□ 0.42
CHD8-211ENST00000556833 ADCY6O43306 1168 aa17.64■□□□□ 0.41
CHD8-211ENST00000556833 ZBED4O75132 1171 aa17.64■□□□□ 0.41
CHD8-211ENST00000556833 ADAMTS4O75173 837 aa17.64■□□□□ 0.41
CHD8-211ENST00000556833 SNAI1O95863 264 aaPredicted RBP17.64■□□□□ 0.41
CHD8-211ENST00000556833 RAG1P15918 1043 aa17.64■□□□□ 0.41
CHD8-211ENST00000556833 COPB2P35606 906 aa17.64■□□□□ 0.41
CHD8-211ENST00000556833 FAM109BQ6ICB4 259 aaPredicted RBP17.64■□□□□ 0.41
CHD8-211ENST00000556833 ZNF444Q8N0Y2 327 aaPredicted RBP17.64■□□□□ 0.41
CHD8-211ENST00000556833 OTUD7AQ8TE49 926 aaPredicted RBP17.64■□□□□ 0.41
CHD8-211ENST00000556833 RNPC3Q96LT9 517 aaKnown RBP17.64■□□□□ 0.41
CHD8-211ENST00000556833 STARD7Q9NQZ5 370 aa17.64■□□□□ 0.41
CHD8-211ENST00000556833 TMEM39AQ9NV64 488 aa17.64■□□□□ 0.41
CHD8-211ENST00000556833 MTMR7Q9Y216 660 aa17.64■□□□□ 0.41
CHD8-211ENST00000556833 DIS3Q9Y2L1 958 aaKnown RBP17.64■□□□□ 0.41
CHD8-211ENST00000556833 PRUNE2Q8WUY3 3088 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 ACLYP53396 1101 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 SNAP25P60880 206 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 KCNA10Q16322 511 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 RASGRP2Q7LDG7 609 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 ANKRD35Q8N283 1001 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 PRPF38AQ8NAV1 312 aaKnown RBP17.63■□□□□ 0.41
CHD8-211ENST00000556833 COL25A1Q9BXS0 654 aaPredicted RBP17.63■□□□□ 0.41
CHD8-211ENST00000556833 TTYH1Q9H313 450 aaPredicted RBP17.63■□□□□ 0.41
CHD8-211ENST00000556833 SEMA6BQ9H3T3 888 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 NRBP1Q9UHY1 535 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 TACC3Q9Y6A5 838 aa17.63■□□□□ 0.41
CHD8-211ENST00000556833 DDX49Q9Y6V7 483 aaKnown RBP17.63■□□□□ 0.41
CHD8-211ENST00000556833 IGKV6D-41A0A0C4DH26 115 aa17.62■□□□□ 0.41
CHD8-211ENST00000556833 C6orf222P0C671 652 aaPredicted RBP17.62■□□□□ 0.41
CHD8-211ENST00000556833 PTGS1P23219 599 aa17.62■□□□□ 0.41
CHD8-211ENST00000556833 IKQ13123 557 aaPredicted RBP17.62■□□□□ 0.41
CHD8-211ENST00000556833 IFNL3Q8IZI9 196 aa17.62■□□□□ 0.41
CHD8-211ENST00000556833 VTI1AQ96AJ9 217 aa17.62■□□□□ 0.41
CHD8-211ENST00000556833 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.62■□□□□ 0.41
CHD8-211ENST00000556833 MTMR4Q9NYA4 1195 aa17.62■□□□□ 0.41
CHD8-211ENST00000556833 FAM184BQ9ULE4 1060 aa17.62■□□□□ 0.41
CHD8-211ENST00000556833 DNAJC25-GNG10A0A024R161 153 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 TSPY3P0CV98 308 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 TSPY8P0CW00 308 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 CNTN2Q02246 1040 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 FPGSQ05932 587 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 FAAP100Q0VG06 881 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 C1orf53Q5VUE5 145 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 SLFN13Q68D06 897 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 GIMAP6Q6P9H5 292 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 CCDC129Q6ZRS4 1044 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 MAFAQ8NHW3 353 aaPredicted RBP17.61■□□□□ 0.41
CHD8-211ENST00000556833 FGD4Q96M96 766 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 FSD1Q9BTV5 496 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 INCENPQ9NQS7 918 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 SYNGAP1Q96PV0 1343 aa17.61■□□□□ 0.41
CHD8-211ENST00000556833 TMEM232C9JQI7 657 aa17.6■□□□□ 0.41
CHD8-211ENST00000556833 TTLL1O95922 423 aa17.6■□□□□ 0.41
CHD8-211ENST00000556833 ACVR2BQ13705 512 aa17.6■□□□□ 0.41
CHD8-211ENST00000556833 CCDC144BQ3MJ40 725 aa17.6■□□□□ 0.41
CHD8-211ENST00000556833 ARMCX2Q7L311 632 aa17.6■□□□□ 0.41
CHD8-211ENST00000556833 SLC38A10Q9HBR0 1119 aa17.6■□□□□ 0.41
CHD8-211ENST00000556833 FEM1BQ9UK73 627 aa17.6■□□□□ 0.41
CHD8-211ENST00000556833 LRRC37A2A6NM11 1700 aa17.6■□□□□ 0.41
CHD8-211ENST00000556833 DCDC2CA8MYV0 355 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 PATL2C9JE40 543 aaKnown RBP17.59■□□□□ 0.41
CHD8-211ENST00000556833 KIAA0355O15063 1070 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 ZFYP08048 801 aaPredicted RBP17.59■□□□□ 0.41
CHD8-211ENST00000556833 BMP3P12645 472 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 GNAT2P19087 354 aa17.59■□□□□ 0.41
CHD8-211ENST00000556833 SMAD3P84022 425 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms