RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 LILRA2Q8N149 483 aa8.04□□□□□ -1.12
HIF1A-209ENST00000556827 CEP170Q5SW79 1584 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 NFIBO00712 420 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 CLEC3AO75596 197 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 GJA8P48165 433 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 CHRNEQ04844 493 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 CDCP2Q5VXM1 449 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
HIF1A-209ENST00000556827 ENOX1Q8TC92 643 aaKnown RBP8.03□□□□□ -1.12
HIF1A-209ENST00000556827 SYTL5Q8TDW5 730 aaPredicted RBP8.03□□□□□ -1.12
HIF1A-209ENST00000556827 VWCEQ96DN2 955 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 ATG4CQ96DT6 458 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 CNNM2Q9H8M5 875 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 KCNK12Q9HB15 430 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 PPT2Q9UMR5 302 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 EFR3BQ9Y2G0 817 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 ERICH3Q5RHP9 1530 aa8.03□□□□□ -1.12
HIF1A-209ENST00000556827 SSU72P8A0A1W2PR75 194 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 RPL10P27635 214 aaKnown RBP8.02□□□□□ -1.13
HIF1A-209ENST00000556827 LRRFIP1Q32MZ4 808 aaKnown RBP8.02□□□□□ -1.13
HIF1A-209ENST00000556827 NBPF12Q5TAG4 269 aaPredicted RBP8.02□□□□□ -1.13
HIF1A-209ENST00000556827 CCDC81Q6ZN84 652 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 RNF111Q6ZNA4 994 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 TMC3Q7Z5M5 1100 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 ANKLE2Q86XL3 938 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 SPPL2CQ8IUH8 684 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 ANKS4BQ8N8V4 417 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 TOX2Q96NM4 488 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 HDAC8Q9BY41 377 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 GPR160Q9UJ42 338 aa8.02□□□□□ -1.13
HIF1A-209ENST00000556827 ADAMTS12P58397 1594 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 KRTAP4-8A0A0G2JLE6 195 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 TMEM253P0C7T8 217 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 NASPP49321 788 aaPredicted RBP8.01□□□□□ -1.13
HIF1A-209ENST00000556827 NBPF9Q3BBW0 867 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 TIGD5Q53EQ6 642 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 DAGLBQ8NCG7 672 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 RASGRP4Q8TDF6 673 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 ZNF512BQ96KM6 892 aaPredicted RBP8.01□□□□□ -1.13
HIF1A-209ENST00000556827 TINF2Q9BSI4 451 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 FOXP3Q9BZS1 431 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 SLC6A17Q9H1V8 727 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 SP110Q9HB58 689 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 ZMYM5Q9UJ78 669 aa8.01□□□□□ -1.13
HIF1A-209ENST00000556827 TOP2BQ02880 1626 aa8□□□□□ -1.13
HIF1A-209ENST00000556827 C1QTNF9P0C862 333 aa8□□□□□ -1.13
HIF1A-209ENST00000556827 CCNFP41002 786 aa8□□□□□ -1.13
HIF1A-209ENST00000556827 PCBP3P57721 371 aaKnown RBP8□□□□□ -1.13
HIF1A-209ENST00000556827 SNW1Q13573 536 aaKnown RBP8□□□□□ -1.13
HIF1A-209ENST00000556827 NR0B2Q15466 257 aa8□□□□□ -1.13
HIF1A-209ENST00000556827 FBXW10Q5XX13 1052 aa8□□□□□ -1.13
HIF1A-209ENST00000556827 WAPLQ7Z5K2 1190 aa8□□□□□ -1.13
HIF1A-209ENST00000556827 ZNF655Q8N720 491 aaPredicted RBP8□□□□□ -1.13
HIF1A-209ENST00000556827 TCTN2Q96GX1 697 aa8□□□□□ -1.13
HIF1A-209ENST00000556827 MKRN2Q9H000 416 aaKnown RBP8□□□□□ -1.13
HIF1A-209ENST00000556827 CWC22Q9HCG8 908 aaKnown RBP8□□□□□ -1.13
HIF1A-209ENST00000556827 TCFL5Q9UL49 500 aa8□□□□□ -1.13
HIF1A-209ENST00000556827 FKTNO75072 461 aa7.99□□□□□ -1.13
HIF1A-209ENST00000556827 NME1P15531 152 aaKnown RBP7.99□□□□□ -1.13
HIF1A-209ENST00000556827 ERCC6L2Q5T890 1561 aa7.99□□□□□ -1.13
HIF1A-209ENST00000556827 FERD3LQ96RJ6 166 aa7.99□□□□□ -1.13
HIF1A-209ENST00000556827 SLC26A8Q96RN1 970 aa7.99□□□□□ -1.13
HIF1A-209ENST00000556827 TCAF2A6NFQ2 919 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 MEIS3P2A8K0S8 358 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 PRAMEF1O95521 474 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 SYPP08247 313 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 PDE6BP35913 854 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 IRF2BP1Q8IU81 584 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 LRRC56Q8IYG6 542 aaPredicted RBP7.98□□□□□ -1.13
HIF1A-209ENST00000556827 USHBP1Q8N6Y0 703 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 ZSCAN18Q8TBC5 510 aaPredicted RBP7.98□□□□□ -1.13
HIF1A-209ENST00000556827 INTS4Q96HW7 963 aaKnown RBP7.98□□□□□ -1.13
HIF1A-209ENST00000556827 SLC6A18Q96N87 628 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 EBF1Q9UH73 591 aa7.98□□□□□ -1.13
HIF1A-209ENST00000556827 YBX2Q9Y2T7 364 aaKnown RBP7.98□□□□□ -1.13
HIF1A-209ENST00000556827 FAM86C2PA6NEL3 165 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 SIGLEC6O43699 453 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 USP2O75604 605 aaPredicted RBP7.97□□□□□ -1.13
HIF1A-209ENST00000556827 ATF4P18848 351 aaPredicted RBP7.97□□□□□ -1.13
HIF1A-209ENST00000556827 SOX9P48436 509 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 SNX17Q15036 470 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 SLC14A2Q15849 920 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 NAALADL2Q58DX5 795 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 ATG14Q6ZNE5 492 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 ZNF605Q86T29 641 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 LINC01599Q8WXQ3 324 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 PRDM14Q9GZV8 571 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 ZNRF3Q9ULT6 936 aa7.97□□□□□ -1.13
HIF1A-209ENST00000556827 BIVM-ERCC5R4GMW8 1640 aa7.96□□□□□ -1.13
HIF1A-209ENST00000556827 NPIPB6E9PJ23 425 aa7.96□□□□□ -1.14
HIF1A-209ENST00000556827 MEIS1O00470 390 aa7.96□□□□□ -1.14
HIF1A-209ENST00000556827 TNFRSF10CO14798 259 aa7.96□□□□□ -1.14
HIF1A-209ENST00000556827 PSPNO60542 156 aa7.96□□□□□ -1.14
HIF1A-209ENST00000556827 CFPP27918 469 aa7.96□□□□□ -1.14
HIF1A-209ENST00000556827 DNAJA1P31689 397 aaKnown RBP7.96□□□□□ -1.14
HIF1A-209ENST00000556827 ZC3H6P61129 1189 aaKnown RBP7.96□□□□□ -1.14
HIF1A-209ENST00000556827 SPOCD1Q6ZMY3 1216 aa7.96□□□□□ -1.14
HIF1A-209ENST00000556827 TMEM192Q8IY95 271 aa7.96□□□□□ -1.14
HIF1A-209ENST00000556827 LINC00116Q8NCU8 138 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms