RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 KCTD1Q719H9 257 aa10.39□□□□□ -0.75
PRKCH-222ENST00000556778 ENAHQ8N8S7 591 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-222ENST00000556778 ATG4CQ96DT6 458 aa10.39□□□□□ -0.75
PRKCH-222ENST00000556778 TRIM47Q96LD4 638 aa10.39□□□□□ -0.75
PRKCH-222ENST00000556778 ZSCAN10Q96SZ4 725 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-222ENST00000556778 PAGR1Q9BTK6 254 aa10.39□□□□□ -0.75
PRKCH-222ENST00000556778 TCP11L1Q9NUJ3 509 aa10.39□□□□□ -0.75
PRKCH-222ENST00000556778 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
PRKCH-222ENST00000556778 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-222ENST00000556778 FLOT1O75955 427 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 LACTBP83111 547 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-222ENST00000556778 PABPC4Q13310 644 aaKnown RBP eCLIP10.38□□□□□ -0.752e-7■■■■■ 64.2
PRKCH-222ENST00000556778 COG2Q14746 738 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 TTBK2Q6IQ55 1244 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 TCEANC2Q96MN5 208 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 LRRC2Q9BYS8 371 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 KRT23Q9C075 422 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 PORCNQ9H237 461 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 CPVLQ9H3G5 476 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 TRIM17Q9Y577 477 aa10.38□□□□□ -0.75
PRKCH-222ENST00000556778 TNKSO95271 1327 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 FRMPD2Q68DX3 1309 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 MYH1P12882 1939 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 AK9Q5TCS8 1911 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 BAZ2AQ9UIF9 1905 aaKnown RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 TMEM232C9JQI7 657 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 WDR46O15213 610 aaKnown RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 FMNL1O95466 1100 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 GOLGA8HP0CJ92 632 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 TOP1P11387 765 aaKnown RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 PCP11498 1178 aaKnown RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 TAL1P17542 331 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 SLC16A2P36021 539 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 PSMC4P43686 418 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 FOSBP53539 338 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 DOCK1Q14185 1865 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 SEC23AQ15436 765 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 NOM1Q5C9Z4 860 aaKnown RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 OTOP1Q7RTM1 612 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 MB21D2Q8IYB1 491 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 GMCL1P1Q8NEA9 526 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 NCOA7Q8NI08 942 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 LPAR1Q92633 364 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 KIFC2Q96AC6 838 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 USP26Q9BXU7 913 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 SH2D4AQ9H788 454 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 EFCC1Q9HA90 598 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 GPCPD1Q9NPB8 672 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 PNMA3Q9UL41 463 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 GABRQQ9UN88 632 aa10.37□□□□□ -0.75
PRKCH-222ENST00000556778 ARIH1Q9Y4X5 557 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-222ENST00000556778 IFIT3O14879 490 aaKnown RBP10.36□□□□□ -0.75
PRKCH-222ENST00000556778 BMP3P12645 472 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 HSPA4P34932 840 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 SLC1A4P43007 532 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 TMEM132BQ14DG7 1078 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 DGKHQ86XP1 1220 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 GPRC5AQ8NFJ5 357 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 IGDCC4Q8TDY8 1250 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 ANKS1AQ92625 1134 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 TTC14Q96N46 770 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 MCOLN1Q9GZU1 580 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 CNNM2Q9H8M5 875 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 HOXC10Q9NYD6 342 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 MORF4L1Q9UBU8 362 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 ISY1Q9ULR0 285 aaKnown RBP10.36□□□□□ -0.75
PRKCH-222ENST00000556778 ADAMTS5Q9UNA0 930 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 SNX14Q9Y5W7 946 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 MYH7P12883 1935 aa10.36□□□□□ -0.75
PRKCH-222ENST00000556778 VWA5AO00534 786 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 PRC1O43663 620 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 PDHBP11177 359 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 GCLCP48506 637 aaPredicted RBP10.35□□□□□ -0.75
PRKCH-222ENST00000556778 SLC4A3P48751 1232 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 ERVK-24P63145 666 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 TRDNQ13061 729 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 PLS1Q14651 629 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 FAM110CQ1W6H9 321 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 LBX2Q6XYB7 198 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 CTU1Q7Z7A3 348 aaKnown RBP10.35□□□□□ -0.75
PRKCH-222ENST00000556778 RALYLQ86SE5 291 aaKnown RBP10.35□□□□□ -0.75
PRKCH-222ENST00000556778 IQCA1Q86XH1 822 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 RAB11FIP4Q86YS3 637 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 ZNF454Q8N9F8 522 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 REPS2Q8NFH8 660 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 KCNB2Q92953 911 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 ERO1AQ96HE7 468 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 GMCL1Q96IK5 515 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 UBAC1Q9BSL1 405 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 MYL10Q9BUA6 226 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 UBA5Q9GZZ9 404 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 PPP1R9AQ9ULJ8 1098 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 RIPK3Q9Y572 518 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 PHIPQ8WWQ0 1821 aa10.35□□□□□ -0.75
PRKCH-222ENST00000556778 PBX2P40425 430 aa10.34□□□□□ -0.75
PRKCH-222ENST00000556778 EXOSC10Q01780 885 aaKnown RBP10.34□□□□□ -0.75
PRKCH-222ENST00000556778 PRKCZQ05513 592 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms