RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 SLC26A6Q9BXS9 759 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 RNF41Q9H4P4 317 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 USP17L12C9JPN9 530 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 USP17L21D6R901 530 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 TOB1P50616 345 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 RBM6P78332 1123 aaKnown RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 TROAPQ12815 778 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 SLC39A14Q15043 492 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 SWT1Q5T5J6 900 aaKnown RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 CRACR2BQ8N4Y2 399 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 CNBD1Q8NA66 436 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 FANCBQ8NB91 859 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 GIMAP7Q8NHV1 300 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 MRRFQ96E11 262 aaKnown RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 GPR101Q96P66 508 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 KCNF1Q9H3M0 494 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 TRPC5Q9UL62 973 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 ZNF646O15015 1829 aaPredicted RBP5.75□□□□□ -1.49
TMEM260-210ENST00000556422 ADAMTSL1Q8N6G6 1762 aa5.75□□□□□ -1.49
TMEM260-210ENST00000556422 MMP1P03956 469 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 ZNF165P49910 485 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 POU5F1Q01860 360 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 RBBP5Q15291 538 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 ENOX2Q16206 610 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 PKN1Q16512 942 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 RTN1Q16799 776 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 ESR2Q92731 530 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 AGBL1Q96MI9 1066 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 CRACR2AQ9BSW2 395 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 SUN2Q9UH99 717 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 QSER1Q2KHR3 1735 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 BTBD18B2RXH4 712 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 NMT2O60551 498 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 CYP2D6P10635 497 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 MARCKSP29966 332 aaPredicted RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 MAGEA8P43361 318 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 DDR1Q08345 913 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 STK38Q15208 465 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 LMBRD2Q68DH5 695 aaPredicted RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 SHC4Q6S5L8 630 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 CCDC73Q6ZRK6 1079 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 PLA2G4DQ86XP0 818 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 ENOX1Q8TC92 643 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 ZSCAN10Q96SZ4 725 aaPredicted RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 ZHX3Q9H4I2 956 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 TTC12Q9H892 705 aaPredicted RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 VEZTQ9HBM0 779 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 PICK1Q9NRD5 415 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 KCNJ14Q9UNX9 436 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 HPSEQ9Y251 543 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 MYH8P13535 1937 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 FAM237AA0A1B0GTK4 181 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 PFKFB1P16118 471 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 SSRP1Q08945 709 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 NAIF1Q69YI7 327 aaPredicted RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 CPLX2Q6PUV4 134 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 NOSTRINQ8IVI9 506 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 TEKT1Q969V4 418 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 BICD1Q96G01 975 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 MPHOSPH6Q99547 160 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 UBAC1Q9BSL1 405 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 XDHP47989 1333 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 ORC4O43929 436 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 PPP6R2O75170 966 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 PLEKHA8P1O95397 391 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 VCAM1P19320 739 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 CMA1P23946 247 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 NR5A1Q13285 461 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 NPY5RQ15761 445 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 RCSD1Q6JBY9 416 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 C15orf52Q6ZUT6 534 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 UBE2Q1Q7Z7E8 422 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 DHX40Q8IX18 779 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 SPC24Q8NBT2 197 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 OXER1Q8TDS5 423 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 THOC1Q96FV9 657 aaKnown RBP5.74□□□□□ -1.49
TMEM260-210ENST00000556422 UIMC1Q96RL1 719 aa5.74□□□□□ -1.49
TMEM260-210ENST00000556422 SYNRGQ9UMZ2 1314 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 ROBO3Q96MS0 1386 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 ERICH2A1L162 156 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 DEXIO95424 95 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 PCP11498 1178 aaKnown RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 GPSM2P81274 684 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 SLMAPQ14BN4 828 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 DIXDC1Q155Q3 683 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 TTC31Q49AM3 519 aaPredicted RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 SBK1Q52WX2 424 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 HHATQ5VTY9 493 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 SYNE3Q6ZMZ3 975 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 DIS3L2Q8IYB7 885 aaKnown RBP5.73□□□□□ -1.49
TMEM260-210ENST00000556422 HS6ST3Q8IZP7 471 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 NUP133Q8WUM0 1156 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 ATRIPQ8WXE1 791 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 VMP1Q96GC9 406 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 CLIC6Q96NY7 704 aa5.73□□□□□ -1.49
TMEM260-210ENST00000556422 UNC45AQ9H3U1 944 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms