RNA–Protein interactions for RNA: ENST00000556348.1

CCDC85C-205, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5

Gene CCDC85C, Length 556 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-205ENST00000556348 SMIM22K7EJ46 135 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 PPIGQ13427 754 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 SNRNP48Q6IEG0 339 aaKnown RBP13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 MFSD5Q6N075 450 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 C16orf86Q6ZW13 317 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 KIF1BPQ96EK5 621 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.7□□□□□ -0.226e-7■□□□□ 10
CCDC85C-205ENST00000556348 TEX13BQ9BXU2 312 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 PAG1Q9NWQ8 432 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 ZNF214Q9UL59 606 aaPredicted RBP13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 SLC4A4Q9Y6R1 1079 aa13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 BAZ2AQ9UIF9 1905 aaKnown RBP13.7□□□□□ -0.22
CCDC85C-205ENST00000556348 PARP14Q460N5 1801 aa13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 SYNGAP1Q96PV0 1343 aa13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 DUSP11O75319 330 aaKnown RBP13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 SNAI1O95863 264 aaPredicted RBP13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 C6orf222P0C671 652 aaPredicted RBP13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 ADD2P35612 726 aa13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 CPXCR1Q8N123 301 aa13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 TMEM199Q8N511 208 aa13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 PCSK9Q8NBP7 692 aaKnown RBP13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 KLHDC9Q8NEP7 349 aa13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 SLF1Q9BQI6 1058 aa13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 VCANP13611 3396 aa13.69□□□□□ -0.22
CCDC85C-205ENST00000556348 ELP1O95163 1332 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 MYADML2A6NDP7 307 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 GRXCR1A8MXD5 290 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 ASGR1P07306 291 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 CSF2RAP15509 400 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 COL9A1P20849 921 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 PBX2P40425 430 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 REPS2Q8NFH8 660 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 NUP88Q99567 741 aaPredicted RBP13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 PBX4Q9BYU1 374 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 TBX21Q9UL17 535 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 EYSQ5T1H1 3165 aa13.68□□□□□ -0.22
CCDC85C-205ENST00000556348 A0A0U1RQG5 324 aaPredicted RBP13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 ZBED4O75132 1171 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 HMMRO75330 724 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 ACRP10323 421 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 ACVR2BQ13705 512 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 GNASQ5JWF2 1037 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 TMEM240Q5SV17 173 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 CCSAPQ6IQ19 270 aaPredicted RBP13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 CTR9Q6PD62 1173 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 PSRC1Q6PGN9 363 aaPredicted RBP13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 MAMDC4Q6UXC1 1216 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 ZNF365Q70YC5 407 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 ANKRD35Q8N283 1001 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 PRPF38AQ8NAV1 312 aaKnown RBP13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 IL27Q8NEV9 243 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 PANK1Q8TE04 598 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 ATXN2LQ8WWM7 1075 aaKnown RBP13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 PPP1R12CQ9BZL4 782 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 MKNK2Q9HBH9 465 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 MSRAQ9UJ68 235 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 RIPK3Q9Y572 518 aa13.67□□□□□ -0.22
CCDC85C-205ENST00000556348 MYO9BQ13459 2157 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 TTC28Q96AY4 2481 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 F5H6K3 240 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 ARVCFO00192 962 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 IGFBP4P22692 258 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 CST5P28325 142 aaPredicted RBP13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 CDK7P50613 346 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 KLRC3Q07444 240 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 UBE3CQ15386 1083 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 CCDC85BQ15834 202 aaPredicted RBP13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 CCDC144BQ3MJ40 725 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 ZSCAN25Q6NSZ9 544 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 C16orf59Q7L2K0 433 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 THEGQ9P2T0 379 aa13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 ARPP21Q9UBL0 812 aaPredicted RBP13.66□□□□□ -0.22
CCDC85C-205ENST00000556348 PRUNE2Q8WUY3 3088 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 DNAJC25-GNG10A0A024R161 153 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 RAB11FIP3O75154 756 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 NDUFB10O96000 172 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 CHGBP05060 677 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 ATP5JP18859 108 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 RAB30Q15771 203 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 KIFC2Q96AC6 838 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 HAUS7Q99871 368 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 CLIP2Q9UDT6 1046 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 CDH23Q9H251 3354 aa13.65□□□□□ -0.22
CCDC85C-205ENST00000556348 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms