RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MOB2Q70IA6 237 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 CCDC84Q86UT8 332 aaPredicted RBP10.64□□□□□ -0.71
ACTN1-218ENST00000556343 ADGRF4Q8IZF3 695 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 CMTR1Q8N1G2 835 aaKnown RBP10.64□□□□□ -0.71
ACTN1-218ENST00000556343 PRPF38AQ8NAV1 312 aaKnown RBP10.64□□□□□ -0.71
ACTN1-218ENST00000556343 CCDC148Q8NFR7 591 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 OPTNQ96CV9 577 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 TANGO6Q9C0B7 1094 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 SH3GLB2Q9NR46 395 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 HOXC10Q9NYD6 342 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 MYH8P13535 1937 aa10.64□□□□□ -0.71
ACTN1-218ENST00000556343 CNTNAP5Q8WYK1 1306 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 VPS37CA5D8V6 355 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-218ENST00000556343 ZBTB5O15062 677 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 ZBTB48P10074 688 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-218ENST00000556343 CETPP11597 493 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 SCG2P13521 617 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 FDPSP14324 419 aaKnown RBP10.63□□□□□ -0.71
ACTN1-218ENST00000556343 VCAM1P19320 739 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 FUT2Q10981 343 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 TTBK2Q6IQ55 1244 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 GADL1Q6ZQY3 521 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 HOMER1Q86YM7 354 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 PROCA1Q8NCQ7 364 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-218ENST00000556343 FBXO18Q8NFZ0 1043 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 PIBF1Q8WXW3 757 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 CLMNQ96JQ2 1002 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 SLF1Q9BQI6 1058 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 ZSCAN16Q9H4T2 348 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-218ENST00000556343 RPAP3Q9H6T3 665 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-218ENST00000556343 EMILIN3Q9NT22 766 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-218ENST00000556343 KCNH4Q9UQ05 1017 aa10.63□□□□□ -0.71
ACTN1-218ENST00000556343 PASKQ96RG2 1323 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 A0A0G2JLL6 359 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-218ENST00000556343 TMEM88BA6NKF7 163 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 IRF6O14896 467 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 FLOT1O75955 427 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 ZSCAN22P10073 491 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-218ENST00000556343 GNA11P29992 359 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 SLC16A2P36021 539 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 ZNF157P51786 506 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-218ENST00000556343 NLRP5P59047 1200 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 COG2Q14746 738 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 CST9Q5W186 159 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 MCTP1Q6DN14 999 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 PPP1R18Q6NYC8 613 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 CATSPERGQ6ZRH7 1159 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 HEATR3Q7Z4Q2 680 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 PRRT2Q7Z6L0 340 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-218ENST00000556343 TEX2Q8IWB9 1127 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 KIFC2Q96AC6 838 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 WNK4Q96J92 1243 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 PIGSQ96S52 555 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-218ENST00000556343 AMNQ9BXJ7 453 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 JMJD4Q9H9V9 463 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 C6orf50Q9HD87 102 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 PNMA3Q9UL41 463 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 PRR12Q9ULL5 1215 aa10.62□□□□□ -0.71
ACTN1-218ENST00000556343 MYPNQ86TC9 1320 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 GREB1LQ9C091 1923 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 CYTH3O43739 400 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 PPFIA3O75145 1194 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 BRD1O95696 1058 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 HOXA7P31268 230 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 DDIT3P35638 169 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 NAPAP54920 295 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 IRX3P78415 501 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 FMR1Q06787 632 aaKnown RBP eCLIP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 CDC37Q16543 378 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 KRT40Q6A162 431 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 MCTP2Q6DN12 878 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 OTUD7BQ6GQQ9 843 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 RGMBQ6NW40 437 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 SAMD1Q6SPF0 538 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 FBXO11Q86XK2 927 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 ZNF784Q8NCA9 323 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 GTF3C2Q8WUA4 911 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 MTMR8Q96EF0 704 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 HHIPL1Q96JK4 782 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 BARHL2Q9NY43 387 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 PPP1R9AQ9ULJ8 1098 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 ABT1Q9ULW3 272 aaKnown RBP10.61□□□□□ -0.71
ACTN1-218ENST00000556343 AGTPBP1Q9UPW5 1226 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 PAPPA2Q9BXP8 1791 aa10.61□□□□□ -0.71
ACTN1-218ENST00000556343 MANSC4A6NHS7 340 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-218ENST00000556343 DSG3P32926 999 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 KRT2P35908 639 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 MRPL12P52815 198 aaKnown RBP10.6□□□□□ -0.71
ACTN1-218ENST00000556343 FOSBP53539 338 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 INHBEP58166 350 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 PKN1Q16512 942 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 QRICH1Q2TAL8 776 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 KIAA1755Q5JYT7 1200 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 SPRYD7Q5W111 196 aa10.6□□□□□ -0.71
ACTN1-218ENST00000556343 BRAPQ7Z569 592 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms