RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 MKNK2Q9HBH9 465 aa15.08■□□□□ 0
APEX1-213ENST00000556296 PRDM5Q9NQX1 630 aaPredicted RBP15.08■□□□□ 0
APEX1-213ENST00000556296 DIS3Q9Y2L1 958 aaKnown RBP15.08■□□□□ 0
APEX1-213ENST00000556296 COL11A1P12107 1806 aaPredicted RBP15.08■□□□□ 0
APEX1-213ENST00000556296 EIF5BO60841 1220 aaKnown RBP15.07■□□□□ 0
APEX1-213ENST00000556296 IGHA2P01877 340 aa15.07■□□□□ 0
APEX1-213ENST00000556296 EEF2P13639 858 aaKnown RBP15.07■□□□□ 0
APEX1-213ENST00000556296 STAT3P40763 770 aa15.07■□□□□ 0
APEX1-213ENST00000556296 ZNF697Q5TEC3 545 aa15.07■□□□□ 0
APEX1-213ENST00000556296 CTR9Q6PD62 1173 aa15.07■□□□□ 0
APEX1-213ENST00000556296 KIAA1211Q6ZU35 1233 aa15.07■□□□□ 0
APEX1-213ENST00000556296 ZNF589Q86UQ0 364 aaPredicted RBP15.07■□□□□ 0
APEX1-213ENST00000556296 RIOX2Q8IUF8 465 aa15.07■□□□□ 0
APEX1-213ENST00000556296 CLEC10AQ8IUN9 316 aa15.07■□□□□ 0
APEX1-213ENST00000556296 NACAP1Q9BZK3 213 aa15.07■□□□□ 0
APEX1-213ENST00000556296 CNPY2Q9Y2B0 182 aa15.07■□□□□ 0
APEX1-213ENST00000556296 PATL2C9JE40 543 aaKnown RBP15.06■□□□□ 0
APEX1-213ENST00000556296 APPP05067 770 aa15.06■□□□□ 0
APEX1-213ENST00000556296 TMEM132BQ14DG7 1078 aa15.06■□□□□ 0
APEX1-213ENST00000556296 LRRC41Q15345 812 aa15.06■□□□□ 0
APEX1-213ENST00000556296 C1orf53Q5VUE5 145 aa15.06■□□□□ 0
APEX1-213ENST00000556296 ANO1Q5XXA6 986 aa15.06■□□□□ 0
APEX1-213ENST00000556296 GIMAP6Q6P9H5 292 aa15.06■□□□□ 0
APEX1-213ENST00000556296 XPNPEP3Q9NQH7 507 aa15.06■□□□□ 0
APEX1-213ENST00000556296 PPP1R9AQ9ULJ8 1098 aa15.06■□□□□ 0
APEX1-213ENST00000556296 GSG1L2A8MUP6 293 aa15.05■□□□□ -0
APEX1-213ENST00000556296 VWA5AO00534 786 aa15.05■□□□□ -0
APEX1-213ENST00000556296 ADCYAP1R1P41586 468 aa15.05■□□□□ -0
APEX1-213ENST00000556296 SBK1Q52WX2 424 aa15.05■□□□□ -0
APEX1-213ENST00000556296 PRAMEF19Q5SWL8 479 aa15.05■□□□□ -0
APEX1-213ENST00000556296 MSL3Q8N5Y2 521 aaKnown RBP15.05■□□□□ -0
APEX1-213ENST00000556296 TINF2Q9BSI4 451 aa15.05■□□□□ -0
APEX1-213ENST00000556296 IL25Q9H293 177 aa15.05■□□□□ -0
APEX1-213ENST00000556296 ADAMTS5Q9UNA0 930 aa15.05■□□□□ -0
APEX1-213ENST00000556296 TACC3Q9Y6A5 838 aa15.05■□□□□ -0
APEX1-213ENST00000556296 MYH4Q9Y623 1939 aa15.04■□□□□ -0
APEX1-213ENST00000556296 ROBO3Q96MS0 1386 aa15.04■□□□□ -0
APEX1-213ENST00000556296 POTEB2H3BUK9 544 aa15.04■□□□□ -0
APEX1-213ENST00000556296 REC8O95072 547 aa15.04■□□□□ -0
APEX1-213ENST00000556296 HSPD1P10809 573 aaKnown RBP15.04■□□□□ -0
APEX1-213ENST00000556296 AKR1A1P14550 325 aa15.04■□□□□ -0
APEX1-213ENST00000556296 TDO2P48775 406 aa15.04■□□□□ -0
APEX1-213ENST00000556296 SNX17Q15036 470 aa15.04■□□□□ -0
APEX1-213ENST00000556296 TRIM60Q495X7 471 aa15.04■□□□□ -0
APEX1-213ENST00000556296 VPS53Q5VIR6 699 aa15.04■□□□□ -0
APEX1-213ENST00000556296 ZNF444Q8N0Y2 327 aaPredicted RBP15.04■□□□□ -0
APEX1-213ENST00000556296 DDX11Q96FC9 970 aa15.04■□□□□ -0
APEX1-213ENST00000556296 DSCC1Q9BVC3 393 aa15.04■□□□□ -0
APEX1-213ENST00000556296 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.04■□□□□ -0
APEX1-213ENST00000556296 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
APEX1-213ENST00000556296 NAPBQ9H115 298 aa15.04■□□□□ -0
APEX1-213ENST00000556296 ANO2Q9NQ90 1003 aa15.04■□□□□ -0
APEX1-213ENST00000556296 ZBED4O75132 1171 aa15.03■□□□□ -0
APEX1-213ENST00000556296 ZNF792Q3KQV3 632 aa15.03■□□□□ -0
APEX1-213ENST00000556296 FAM47AQ5JRC9 791 aa15.03■□□□□ -0
APEX1-213ENST00000556296 FAM83BQ5T0W9 1011 aa15.03■□□□□ -0
APEX1-213ENST00000556296 IFNL3Q8IZI9 196 aa15.03■□□□□ -0
APEX1-213ENST00000556296 PRPF38AQ8NAV1 312 aaKnown RBP15.03■□□□□ -0
APEX1-213ENST00000556296 NUP133Q8WUM0 1156 aa15.03■□□□□ -0
APEX1-213ENST00000556296 FERMT2Q96AC1 680 aa15.03■□□□□ -0
APEX1-213ENST00000556296 SLF1Q9BQI6 1058 aa15.03■□□□□ -0
APEX1-213ENST00000556296 SPC25Q9HBM1 224 aa15.03■□□□□ -0
APEX1-213ENST00000556296 PHF24Q9UPV7 400 aa15.03■□□□□ -0
APEX1-213ENST00000556296 ZMYM6O95789 1325 aa15.02■□□□□ -0
APEX1-213ENST00000556296 PGK2P07205 417 aa15.02■□□□□ -0
APEX1-213ENST00000556296 SLC3A2P08195 630 aaKnown RBP15.02■□□□□ -0
APEX1-213ENST00000556296 ALX1Q15699 326 aa15.02■□□□□ -0
APEX1-213ENST00000556296 BADQ92934 168 aa15.02■□□□□ -0
APEX1-213ENST00000556296 TSEN34Q9BSV6 310 aaKnown RBP15.02■□□□□ -0
APEX1-213ENST00000556296 EPB41L4AQ9HCS5 686 aaPredicted RBP15.02■□□□□ -0
APEX1-213ENST00000556296 NYAP2Q9P242 653 aa15.02■□□□□ -0
APEX1-213ENST00000556296 CTNNA3Q9UI47 895 aa15.02■□□□□ -0
APEX1-213ENST00000556296 FAM184BQ9ULE4 1060 aa15.02■□□□□ -0
APEX1-213ENST00000556296 SYNPO2Q9UMS6 1093 aa15.02■□□□□ -0
APEX1-213ENST00000556296 PLXNA1Q9UIW2 1896 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 SMCHD1A6NHR9 2005 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 MINDY4BA8MYZ0 360 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 FOXP2O15409 715 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 CLTBP09497 229 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 RASA1P20936 1047 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 SMAD3P84022 425 aaKnown RBP15.01□□□□□ -0.01
APEX1-213ENST00000556296 TLE2Q04725 743 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 SHHQ15465 462 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 C8orf34Q49A92 452 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 PPP4R3BQ5MIZ7 849 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 SNRNP48Q6IEG0 339 aaKnown RBP15.01□□□□□ -0.01
APEX1-213ENST00000556296 CCDC174Q6PII3 467 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 PDLIM7Q9NR12 457 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 FBXO28Q9NVF7 368 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 FBXO40Q9UH90 709 aa15.01□□□□□ -0.01
APEX1-213ENST00000556296 ZNF214Q9UL59 606 aaPredicted RBP15.01□□□□□ -0.01
APEX1-213ENST00000556296 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
APEX1-213ENST00000556296 SYNGAP1Q96PV0 1343 aa15□□□□□ -0.01
APEX1-213ENST00000556296 MOXD2PA6NHM9 499 aa15□□□□□ -0.01
APEX1-213ENST00000556296 DCDC2CA8MYV0 355 aa15□□□□□ -0.01
APEX1-213ENST00000556296 F5H6K3 240 aa15□□□□□ -0.01
APEX1-213ENST00000556296 EPB41L2O43491 1005 aaKnown RBP15□□□□□ -0.01
APEX1-213ENST00000556296 FGAP02671 866 aa15□□□□□ -0.01
APEX1-213ENST00000556296 FDX1P10109 184 aa15□□□□□ -0.01
APEX1-213ENST00000556296 RAG1P15918 1043 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms