RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 LZTS2Q9BRK4 669 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 RBM28Q9NW13 759 aaKnown RBP11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 HPS5Q9UPZ3 1129 aa11.71□□□□□ -0.53
MTHFD1-213ENST00000556284 NID2Q14112 1375 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 A0A0G2JLL6 359 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 GOLGA8AA7E2F4 631 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 PARP1P09874 1014 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 ZBTB48P10074 688 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 HOXB3P14651 431 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 SLC1A4P43007 532 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 ZNF157P51786 506 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 SNAPC2Q13487 334 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 RTN1Q16799 776 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 ASPRV1Q53RT3 343 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 GPATCH4Q5T3I0 446 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 SPRYD7Q5W111 196 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 PRRT2Q7Z6L0 340 aaPredicted RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 CCDC102AQ96A19 550 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 MYL10Q9BUA6 226 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 ABT1Q9ULW3 272 aaKnown RBP11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 PCDHGA4Q9Y5G9 962 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 DOCK1Q14185 1865 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 TRPM7Q96QT4 1865 aa11.7□□□□□ -0.54
MTHFD1-213ENST00000556284 WDR46O15213 610 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 RAD21O60216 631 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 EVI5O60447 810 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 BMP3P12645 472 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 SMARCA1P28370 1054 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 GJA5P36382 358 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 GTF2A2P52657 109 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 HMGCS2P54868 508 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 CCT2P78371 535 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 ZNF543Q08ER8 600 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 SCRN1Q12765 414 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 STK3Q13188 491 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 CUL4AQ13619 759 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 ZYXQ15942 572 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 KIAA1755Q5JYT7 1200 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 SMYD5Q6GMV2 418 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 CPLX2Q6PUV4 134 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 FASTKD5Q7L8L6 764 aaKnown RBP11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 RAB11FIP4Q86YS3 637 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 GTF3C6Q969F1 213 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 MAD2L2Q9UI95 211 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
MTHFD1-213ENST00000556284 CPLX1O14810 134 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 PLA2G6O60733 806 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 CDKL5O76039 1030 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 LARGE1O95461 756 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 RXRAP19793 462 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 ADD1P35611 737 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 CCDC96Q2M329 555 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 TMTC3Q6ZXV5 915 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 RASAL3Q86YV0 1011 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 SPICE1Q8N0Z3 855 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 NECAB1Q8N987 351 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 CHURC1Q8WUH1 139 aa11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 LLPHQ9BRT6 129 aaKnown RBP11.68□□□□□ -0.54
MTHFD1-213ENST00000556284 ATAD5Q96QE3 1844 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 KLRF2D3W0D1 207 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 SLC10A3P09131 477 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 CETPP11597 493 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 VCAM1P19320 739 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 CDC27P30260 824 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 FAM83BQ5T0W9 1011 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 BTNL9Q6UXG8 535 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 FAM160B2Q86V87 743 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 STAG2Q8N3U4 1231 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 INTS4Q96HW7 963 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 NCOA5Q9HCD5 579 aaKnown RBP11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 FEM1BQ9UK73 627 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 OTOFQ9HC10 1997 aa11.67□□□□□ -0.54
MTHFD1-213ENST00000556284 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 MANSC4A6NHS7 340 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L15C9J2P7 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L13C9JLJ4 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 TMEM232C9JQI7 657 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L11C9JVI0 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L18D6R9N7 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L22D6RA61 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L17D6RBQ6 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L19D6RCP7 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L20D6RJB6 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 GOLGA8HP0CJ92 632 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 IFNAR1P17181 557 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 HOXA7P31268 230 aaPredicted RBP11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 INHBEP58166 350 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 USP17L24Q0WX57 530 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 PABPC4Q13310 644 aaKnown RBP eCLIP11.66□□□□□ -0.543e-23■■■■■ 42.9
MTHFD1-213ENST00000556284 MOGSQ13724 837 aa11.66□□□□□ -0.54
MTHFD1-213ENST00000556284 NTRK3Q16288 839 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms