RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 NUDT8Q8WV74 236 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 PIK3R5Q8WYR1 880 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 CDCA5Q96FF9 252 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 METTL22Q9BUU2 404 aaPredicted RBP11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 JPH1Q9HDC5 661 aaPredicted RBP11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 IFT57Q9NWB7 429 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 FAM13BQ9NYF5 915 aa11.53□□□□□ -0.56
GTF2A1-204ENST00000556268 WTIPA6NIX2 430 aaPredicted RBP11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 LILRB5O75023 590 aa11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 UFL1O94874 794 aa11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 CPB1P15086 417 aa11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 GNAI1P63096 354 aa11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 GPLD1P80108 840 aa11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.572e-10■□□□□ 9.2
GTF2A1-204ENST00000556268 C8orf58Q8NAV2 365 aa11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 GTF3C2Q8WUA4 911 aaPredicted RBP11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 MYD88Q99836 296 aa11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 CWC25Q9NXE8 425 aaPredicted RBP11.52□□□□□ -0.57
GTF2A1-204ENST00000556268 ELL2O00472 640 aaPredicted RBP11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 APAF1O14727 1248 aa11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 PCSK7Q16549 785 aa11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 ANGEL2Q5VTE6 544 aaKnown RBP11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 ATCAYQ86WG3 371 aa11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 CHMP4AQ9BY43 222 aa11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 MYOZ2Q9NPC6 264 aa11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 TLR7Q9NYK1 1049 aaKnown RBP11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 GGA3Q9NZ52 723 aa11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 XDHP47989 1333 aa11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 PITPNM2Q9BZ72 1349 aa11.51□□□□□ -0.57
GTF2A1-204ENST00000556268 SCN9AQ15858 1988 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 MMP20O60882 483 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 IGKV5-2P06315 115 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 MMP14P50281 582 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 CALD1Q05682 793 aaKnown RBP11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 MTMR3Q13615 1198 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 KSR2Q6VAB6 950 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 RASAL3Q86YV0 1011 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 ANKRD18AQ8IVF6 992 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 TTLL11Q8NHH1 800 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 BSDC1Q9NW68 430 aaPredicted RBP11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 MINPP1Q9UNW1 487 aa11.5□□□□□ -0.57
GTF2A1-204ENST00000556268 IGHA1P01876 353 aa11.49□□□□□ -0.57
GTF2A1-204ENST00000556268 TM4SF4P48230 202 aa11.49□□□□□ -0.57
GTF2A1-204ENST00000556268 NRLP54845 237 aa11.49□□□□□ -0.57
GTF2A1-204ENST00000556268 PERM1Q5SV97 790 aa11.49□□□□□ -0.57
GTF2A1-204ENST00000556268 DACT2Q5SW24 774 aa11.49□□□□□ -0.57
GTF2A1-204ENST00000556268 CCDC30Q5VVM6 783 aa11.49□□□□□ -0.57
GTF2A1-204ENST00000556268 LPIN3Q9BQK8 851 aa11.49□□□□□ -0.57
GTF2A1-204ENST00000556268 PRKRIP1Q9H875 184 aaPredicted RBP11.49□□□□□ -0.57
GTF2A1-204ENST00000556268 SPDYE3A6NKU9 549 aa11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 DDX58O95786 925 aaKnown RBP11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 PSAPP07602 524 aa11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 MPSTP25325 297 aa11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 ARID4AP29374 1257 aaPredicted RBP11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 NBPF9Q3BBW0 867 aa11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 NOM1Q5C9Z4 860 aaKnown RBP11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 STRIP1Q5VSL9 837 aa11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 HFE2Q6ZVN8 426 aa11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 CTU1Q7Z7A3 348 aaKnown RBP11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 TSPYL6Q8N831 410 aa11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 CDC5LQ99459 802 aaKnown RBP11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 MAP3K2Q9Y2U5 619 aa11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 TNRC18O15417 2968 aaPredicted RBP11.48□□□□□ -0.57
GTF2A1-204ENST00000556268 PI4KAP2A4QPH2 592 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 UBE2Q2LH0YL09 131 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 FAM229AH3BQW9 127 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 WNT10BO00744 389 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 RGS9O75916 674 aaPredicted RBP11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 SPATA31C1P0DKV0 1188 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 AFF1P51825 1210 aaKnown RBP11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 CTSWP56202 376 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 PLAURQ03405 335 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 PKN2Q16513 984 aaKnown RBP11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 MOB2Q70IA6 237 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 PI4KAP1Q8N8J0 262 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 ZBED3Q96IU2 234 aaPredicted RBP11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 NSUN5Q96P11 429 aaKnown RBP11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 SPOCK3Q9BQ16 436 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 COA1Q9GZY4 146 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 GREM2Q9H772 168 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 LEMD3Q9Y2U8 911 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 PDE4DIPQ5VU43 2346 aa11.47□□□□□ -0.57
GTF2A1-204ENST00000556268 MED23Q9ULK4 1368 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 PROCP04070 461 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 CSF1RP07333 972 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 EIF2AK2P19525 551 aaKnown RBP11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 CCT4P50991 539 aaKnown RBP11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 LDLRAD1Q5T700 205 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 PRAMEF18Q5VWM3 479 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 RETREG2Q8NC44 543 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 MXD3Q9BW11 206 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 PLA2G12BQ9BX93 195 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 FRRS1LQ9P0K9 344 aa11.46□□□□□ -0.57
GTF2A1-204ENST00000556268 MSTNO14793 375 aa11.45□□□□□ -0.58
GTF2A1-204ENST00000556268 HOXD8P13378 290 aaPredicted RBP11.45□□□□□ -0.58
GTF2A1-204ENST00000556268 SOX18P35713 384 aa11.45□□□□□ -0.58
GTF2A1-204ENST00000556268 CHRNA4P43681 627 aa11.45□□□□□ -0.58
GTF2A1-204ENST00000556268 CASP7P55210 303 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms