RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-222ENST00000555914 CCDC17Q96LX7 622 aa10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 STRBPQ96SI9 672 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 SENP6Q9GZR1 1112 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 ARHGEF10LQ9HCE6 1279 aa10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 BMP8BP34820 402 aa10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 ATN1P54259 1190 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 C1QBPQ07021 282 aaKnown RBP10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 CASC1Q6TDU7 716 aa10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 KBTBD3Q8NAB2 608 aa10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 USP26Q9BXU7 913 aa10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 GRPEL1Q9HAV7 217 aa10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 EPB41L4AQ9HCS5 686 aaPredicted RBP10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 ZNF236Q9UL36 1845 aa10.63□□□□□ -0.71
HNRNPC-222ENST00000555914 GREB1LQ9C091 1923 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 M0R2C6 588 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 WDR46O15213 610 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 STRNO43815 780 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 RAD21O60216 631 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 CD2BP2O95400 341 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 RASA1P20936 1047 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 TERF1P54274 439 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 MDM2Q00987 491 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 GJC2Q5T442 439 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 ZSCAN25Q6NSZ9 544 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 MB21D1Q8N884 522 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 SHCBP1Q8NEM2 672 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 OTUD7AQ8TE49 926 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 SEC62Q99442 399 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 NUP88Q99567 741 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 KANSL2Q9H9L4 492 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 ARPP21Q9UBL0 812 aaPredicted RBP10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 ADAMTS5Q9UNA0 930 aa10.62□□□□□ -0.71
HNRNPC-222ENST00000555914 MINDY4BA8MYZ0 360 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 PRDM1O75626 825 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 PGK2P07205 417 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 CCDC173Q0VFZ6 552 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 OLFML2BQ68BL8 750 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 AMOTL1Q8IY63 956 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 MAML3Q96JK9 1138 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 MAP7D2Q96T17 732 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 MROH8Q9H579 483 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 SH2D4AQ9H788 454 aa10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 RRAGDQ9NQL2 400 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-222ENST00000555914 ESPNB1AK53 854 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 VWA5AO00534 786 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 RNF113AO15541 343 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 GPAA1O43292 621 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 REC8O95072 547 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 SBK1Q52WX2 424 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 Q7L0L9 218 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 REPS2Q8NFH8 660 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 APPBP2Q92624 585 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 ZNF214Q9UL59 606 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 PPP1R9AQ9ULJ8 1098 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 DNM1LO00429 736 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 MSCO60682 206 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 MYCNP04198 464 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 SDSP20132 328 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 NUCB2P80303 420 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 PI4K2BQ8TCG2 481 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 GOPCQ9HD26 462 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 PLXNA1Q9UIW2 1896 aa10.6□□□□□ -0.71
HNRNPC-222ENST00000555914 MUC3AQ02505 3323 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 MYH4Q9Y623 1939 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 SALL3Q9BXA9 1300 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 F5H6K3 240 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 SEPT4O43236 478 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 FCER1AP12319 257 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 TAL1P17542 331 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 BRD2P25440 801 aaKnown RBP10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 STAT3P40763 770 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 KLRC3Q07444 240 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 HS1BP3Q53T59 392 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 FAM47AQ5JRC9 791 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 RIOX2Q8IUF8 465 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 ABRAQ8N0Z2 381 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 MKNK2Q9HBH9 465 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 RNF216Q9NWF9 866 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 RIPK3Q9Y572 518 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 ROBO3Q96MS0 1386 aa10.59□□□□□ -0.71
HNRNPC-222ENST00000555914 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 EPB41L2O43491 1005 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 SLC25A27O95847 323 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 NDUFB10O96000 172 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 APPP05067 770 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 TDO2P48775 406 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 LRIT3Q3SXY7 679 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 GIMAP6Q6P9H5 292 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 MTERF4Q7Z6M4 381 aaKnown RBP10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 IFNL3Q8IZI9 196 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 FERMT2Q96AC1 680 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 LENG1Q96BZ8 264 aaPredicted RBP10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 IL17RAQ96F46 866 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 MMP19Q99542 508 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 NYAP2Q9P242 653 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 CLIP2Q9UDT6 1046 aa10.58□□□□□ -0.72
HNRNPC-222ENST00000555914 PATL2C9JE40 543 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms