RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 MCM3APO60318 1980 aa23.49■■□□□ 1.35
PRKCH-219ENST00000555906 TSPY3P0CV98 308 aa23.48■■□□□ 1.35
PRKCH-219ENST00000555906 TSPY8P0CW00 308 aa23.48■■□□□ 1.35
PRKCH-219ENST00000555906 MDM2Q00987 491 aaPredicted RBP23.48■■□□□ 1.35
PRKCH-219ENST00000555906 PPARAQ07869 468 aa23.48■■□□□ 1.35
PRKCH-219ENST00000555906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.48■■□□□ 1.35
PRKCH-219ENST00000555906 LRRC47Q8N1G4 583 aaKnown RBP23.48■■□□□ 1.35
PRKCH-219ENST00000555906 MSL3Q8N5Y2 521 aaKnown RBP23.48■■□□□ 1.35
PRKCH-219ENST00000555906 FEM1BQ9UK73 627 aa23.48■■□□□ 1.35
PRKCH-219ENST00000555906 RARBP10826 455 aa23.47■■□□□ 1.35
PRKCH-219ENST00000555906 SLC39A5Q6ZMH5 540 aa23.47■■□□□ 1.35
PRKCH-219ENST00000555906 SLC38A10Q9HBR0 1119 aa23.47■■□□□ 1.35
PRKCH-219ENST00000555906 XPNPEP3Q9NQH7 507 aa23.47■■□□□ 1.35
PRKCH-219ENST00000555906 PRKAG2Q9UGJ0 569 aa23.47■■□□□ 1.35
PRKCH-219ENST00000555906 LAMA2P24043 3122 aaKnown RBP23.46■■□□□ 1.35
PRKCH-219ENST00000555906 ZBED4O75132 1171 aa23.46■■□□□ 1.35
PRKCH-219ENST00000555906 AKR1A1P14550 325 aa23.46■■□□□ 1.35
PRKCH-219ENST00000555906 KIFC2Q96AC6 838 aa23.46■■□□□ 1.35
PRKCH-219ENST00000555906 SYNGAP1Q96PV0 1343 aa23.46■■□□□ 1.35
PRKCH-219ENST00000555906 LBHD1Q9BQE6 289 aaPredicted RBP23.46■■□□□ 1.35
PRKCH-219ENST00000555906 ZBTB47Q9UFB7 747 aaPredicted RBP23.46■■□□□ 1.35
PRKCH-219ENST00000555906 ATP11BQ9Y2G3 1177 aa23.46■■□□□ 1.35
PRKCH-219ENST00000555906 RIPK3Q9Y572 518 aa23.46■■□□□ 1.35
PRKCH-219ENST00000555906 DNAJC25-GNG10A0A024R161 153 aa23.45■■□□□ 1.34
PRKCH-219ENST00000555906 FOXP2O15409 715 aa23.45■■□□□ 1.34
PRKCH-219ENST00000555906 MYCNP04198 464 aaPredicted RBP23.45■■□□□ 1.34
PRKCH-219ENST00000555906 ZNF865P0CJ78 1059 aaPredicted RBP23.45■■□□□ 1.34
PRKCH-219ENST00000555906 OAZ1P54368 228 aa23.45■■□□□ 1.34
PRKCH-219ENST00000555906 C1orf53Q5VUE5 145 aa23.45■■□□□ 1.34
PRKCH-219ENST00000555906 CRBNQ96SW2 442 aa23.45■■□□□ 1.34
PRKCH-219ENST00000555906 PHF24Q9UPV7 400 aa23.45■■□□□ 1.34
PRKCH-219ENST00000555906 CNPY2Q9Y2B0 182 aa23.45■■□□□ 1.34
PRKCH-219ENST00000555906 CTDP1Q9Y5B0 961 aaPredicted RBP23.45■■□□□ 1.34
PRKCH-219ENST00000555906 LRRC37A2A6NM11 1700 aa23.45■■□□□ 1.34
PRKCH-219ENST00000555906 BMP3P12645 472 aa23.44■■□□□ 1.34
PRKCH-219ENST00000555906 ADCYAP1R1P41586 468 aa23.44■■□□□ 1.34
PRKCH-219ENST00000555906 HDAC1Q13547 482 aaPredicted RBP23.44■■□□□ 1.34
PRKCH-219ENST00000555906 PPP4R3BQ5MIZ7 849 aa23.44■■□□□ 1.34
PRKCH-219ENST00000555906 SLFN13Q68D06 897 aa23.44■■□□□ 1.34
PRKCH-219ENST00000555906 ZNF467Q7Z7K2 595 aaPredicted RBP23.44■■□□□ 1.34
PRKCH-219ENST00000555906 RNF180Q86T96 592 aa23.44■■□□□ 1.34
PRKCH-219ENST00000555906 CPXCR1Q8N123 301 aa23.44■■□□□ 1.34
PRKCH-219ENST00000555906 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.44■■□□□ 1.34
PRKCH-219ENST00000555906 FDX1P10109 184 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 TAL1P17542 331 aaPredicted RBP23.43■■□□□ 1.34
PRKCH-219ENST00000555906 TFAP4Q01664 338 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 TRIM60Q495X7 471 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 ANKRD45Q5TZF3 282 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 MAMDC4Q6UXC1 1216 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 CCDC129Q6ZRS4 1044 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 EVI5LQ96CN4 794 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 DDX11Q96FC9 970 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 GMCL1Q96IK5 515 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 RAVER2Q9HCJ3 691 aaKnown RBP23.43■■□□□ 1.34
PRKCH-219ENST00000555906 FBXO40Q9UH90 709 aa23.43■■□□□ 1.34
PRKCH-219ENST00000555906 STAT2P52630 851 aa23.42■■□□□ 1.34
PRKCH-219ENST00000555906 CHST13Q8NET6 341 aa23.42■■□□□ 1.34
PRKCH-219ENST00000555906 PDLIM7Q9NR12 457 aa23.42■■□□□ 1.34
PRKCH-219ENST00000555906 PGK1P00558 417 aa23.41■■□□□ 1.34
PRKCH-219ENST00000555906 FAM160B2Q86V87 743 aa23.41■■□□□ 1.34
PRKCH-219ENST00000555906 FERMT2Q96AC1 680 aa23.41■■□□□ 1.34
PRKCH-219ENST00000555906 ANAPC4Q9UJX5 808 aa23.41■■□□□ 1.34
PRKCH-219ENST00000555906 ADAMTS4O75173 837 aa23.4■■□□□ 1.34
PRKCH-219ENST00000555906 PDE1AP54750 535 aa23.4■■□□□ 1.34
PRKCH-219ENST00000555906 TICAM2Q86XR7 235 aa23.4■■□□□ 1.34
PRKCH-219ENST00000555906 DEFB123Q8N688 67 aa23.4■■□□□ 1.34
PRKCH-219ENST00000555906 LENG1Q96BZ8 264 aaPredicted RBP23.4■■□□□ 1.34
PRKCH-219ENST00000555906 PRDM5Q9NQX1 630 aaPredicted RBP23.4■■□□□ 1.34
PRKCH-219ENST00000555906 HELLSQ9NRZ9 838 aa23.4■■□□□ 1.34
PRKCH-219ENST00000555906 SYNRGQ9UMZ2 1314 aa23.39■■□□□ 1.34
PRKCH-219ENST00000555906 LAMA4Q16363 1823 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 A0A1W2PQ45 241 aaPredicted RBP23.39■■□□□ 1.33
PRKCH-219ENST00000555906 A0A1W2PQY0 241 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 TSPY2A6NKD2 308 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 TMEM232C9JQI7 657 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 SNAI1O95863 264 aaPredicted RBP23.39■■□□□ 1.33
PRKCH-219ENST00000555906 SLC1A4P43007 532 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 SLC4A3P48751 1232 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 ANKRD35Q8N283 1001 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 FGD4Q96M96 766 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 ZHX1Q9UKY1 873 aaPredicted RBP23.39■■□□□ 1.33
PRKCH-219ENST00000555906 FAM184BQ9ULE4 1060 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 STX8Q9UNK0 236 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 LCTP09848 1927 aa23.39■■□□□ 1.33
PRKCH-219ENST00000555906 PLA2G6O60733 806 aa23.38■■□□□ 1.33
PRKCH-219ENST00000555906 CTDSPL2Q05D32 466 aa23.38■■□□□ 1.33
PRKCH-219ENST00000555906 VPS53Q5VIR6 699 aa23.38■■□□□ 1.33
PRKCH-219ENST00000555906 Q7L0L9 218 aa23.38■■□□□ 1.33
PRKCH-219ENST00000555906 CHURC1Q8WUH1 139 aa23.38■■□□□ 1.33
PRKCH-219ENST00000555906 STAG1Q8WVM7 1258 aa23.38■■□□□ 1.33
PRKCH-219ENST00000555906 TSEN34Q9BSV6 310 aaKnown RBP23.38■■□□□ 1.33
PRKCH-219ENST00000555906 ACAD9Q9H845 621 aa23.38■■□□□ 1.33
PRKCH-219ENST00000555906 ISY1Q9ULR0 285 aaKnown RBP23.38■■□□□ 1.33
PRKCH-219ENST00000555906 ZMYM6O95789 1325 aa23.37■■□□□ 1.33
PRKCH-219ENST00000555906 ORC4O43929 436 aa23.37■■□□□ 1.33
PRKCH-219ENST00000555906 AAMPQ13685 434 aa23.37■■□□□ 1.33
PRKCH-219ENST00000555906 ALX1Q15699 326 aa23.37■■□□□ 1.33
PRKCH-219ENST00000555906 IL17RBQ9NRM6 502 aa23.37■■□□□ 1.33
PRKCH-219ENST00000555906 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.37■■□□□ 1.33
PRKCH-219ENST00000555906 ZNF536O15090 1300 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms