RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 FOSL2P15408 326 aa23.26■■□□□ 1.31
FOXN3-211ENST00000555855 ACLYP53396 1101 aa23.26■■□□□ 1.31
FOXN3-211ENST00000555855 KLRC3Q07444 240 aa23.26■■□□□ 1.31
FOXN3-211ENST00000555855 SNRNP48Q6IEG0 339 aaKnown RBP23.26■■□□□ 1.31
FOXN3-211ENST00000555855 PRPF38AQ8NAV1 312 aaKnown RBP23.26■■□□□ 1.31
FOXN3-211ENST00000555855 NYAP2Q9P242 653 aa23.26■■□□□ 1.31
FOXN3-211ENST00000555855 PARP14Q460N5 1801 aa23.26■■□□□ 1.31
FOXN3-211ENST00000555855 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.25■■□□□ 1.31
FOXN3-211ENST00000555855 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.25■■□□□ 1.31
FOXN3-211ENST00000555855 MOXD2PA6NHM9 499 aa23.25■■□□□ 1.31
FOXN3-211ENST00000555855 ADAMTS4O75173 837 aa23.25■■□□□ 1.31
FOXN3-211ENST00000555855 SBK1Q52WX2 424 aa23.25■■□□□ 1.31
FOXN3-211ENST00000555855 ANKRD33Q7Z3H0 272 aa23.25■■□□□ 1.31
FOXN3-211ENST00000555855 LRRCC1Q9C099 1032 aa23.25■■□□□ 1.31
FOXN3-211ENST00000555855 ZHX1Q9UKY1 873 aaPredicted RBP23.25■■□□□ 1.31
FOXN3-211ENST00000555855 SYNGAP1Q96PV0 1343 aa23.25■■□□□ 1.31
FOXN3-211ENST00000555855 MINDY4BA8MYZ0 360 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 EPHB4P54760 987 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 FAAP100Q0VG06 881 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 KCNA10Q16322 511 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 CPXCR1Q8N123 301 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 STK11IPQ8N1F8 1099 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 VTI1AQ96AJ9 217 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 STRBPQ96SI9 672 aaKnown RBP23.24■■□□□ 1.31
FOXN3-211ENST00000555855 NUP88Q99567 741 aaPredicted RBP23.24■■□□□ 1.31
FOXN3-211ENST00000555855 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.24■■□□□ 1.31
FOXN3-211ENST00000555855 SPC25Q9HBM1 224 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 ROBO3Q96MS0 1386 aa23.24■■□□□ 1.31
FOXN3-211ENST00000555855 DUSP11O75319 330 aaKnown RBP23.23■■□□□ 1.31
FOXN3-211ENST00000555855 SNAI1O95863 264 aaPredicted RBP23.23■■□□□ 1.31
FOXN3-211ENST00000555855 GIMAP6Q6P9H5 292 aa23.23■■□□□ 1.31
FOXN3-211ENST00000555855 MAMDC4Q6UXC1 1216 aa23.23■■□□□ 1.31
FOXN3-211ENST00000555855 ZNF444Q8N0Y2 327 aaPredicted RBP23.23■■□□□ 1.31
FOXN3-211ENST00000555855 PCSK9Q8NBP7 692 aaKnown RBP23.23■■□□□ 1.31
FOXN3-211ENST00000555855 KLHDC9Q8NEP7 349 aa23.23■■□□□ 1.31
FOXN3-211ENST00000555855 LENG1Q96BZ8 264 aaPredicted RBP23.23■■□□□ 1.31
FOXN3-211ENST00000555855 GLT1D1Q96MS3 346 aa23.23■■□□□ 1.31
FOXN3-211ENST00000555855 ZNF287Q9HBT7 754 aa23.23■■□□□ 1.31
FOXN3-211ENST00000555855 CLIP2Q9UDT6 1046 aa23.23■■□□□ 1.31
FOXN3-211ENST00000555855 TIMP1P01033 207 aa23.22■■□□□ 1.31
FOXN3-211ENST00000555855 RASA1P20936 1047 aa23.22■■□□□ 1.31
FOXN3-211ENST00000555855 CCDC174Q6PII3 467 aa23.22■■□□□ 1.31
FOXN3-211ENST00000555855 ZNF467Q7Z7K2 595 aaPredicted RBP23.22■■□□□ 1.31
FOXN3-211ENST00000555855 ANKRD35Q8N283 1001 aa23.22■■□□□ 1.31
FOXN3-211ENST00000555855 SYMPKQ92797 1274 aaKnown RBP23.22■■□□□ 1.31
FOXN3-211ENST00000555855 RIPK3Q9Y572 518 aa23.22■■□□□ 1.31
FOXN3-211ENST00000555855 SYNRGQ9UMZ2 1314 aa23.22■■□□□ 1.31
FOXN3-211ENST00000555855 LAMA2P24043 3122 aaKnown RBP23.21■■□□□ 1.31
FOXN3-211ENST00000555855 ATP2A1O14983 1001 aa23.21■■□□□ 1.31
FOXN3-211ENST00000555855 NDUFB10O96000 172 aa23.21■■□□□ 1.31
FOXN3-211ENST00000555855 ACVR2BQ13705 512 aa23.21■■□□□ 1.31
FOXN3-211ENST00000555855 ABHD16BQ9H3Z7 469 aa23.21■■□□□ 1.31
FOXN3-211ENST00000555855 FBXO40Q9UH90 709 aa23.21■■□□□ 1.31
FOXN3-211ENST00000555855 ELP1O95163 1332 aa23.21■■□□□ 1.31
FOXN3-211ENST00000555855 MROH7Q68CQ1 1323 aa23.21■■□□□ 1.31
FOXN3-211ENST00000555855 MYH7P12883 1935 aa23.2■■□□□ 1.3
FOXN3-211ENST00000555855 DNAJC25-GNG10A0A024R161 153 aa23.2■■□□□ 1.3
FOXN3-211ENST00000555855 GSG1L2A8MUP6 293 aa23.2■■□□□ 1.3
FOXN3-211ENST00000555855 C6orf222P0C671 652 aaPredicted RBP23.2■■□□□ 1.3
FOXN3-211ENST00000555855 MIER1Q8N108 512 aa23.2■■□□□ 1.3
FOXN3-211ENST00000555855 KIFC2Q96AC6 838 aa23.2■■□□□ 1.3
FOXN3-211ENST00000555855 ECHDC1Q9NTX5 307 aa23.2■■□□□ 1.3
FOXN3-211ENST00000555855 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.2■■□□□ 1.3
FOXN3-211ENST00000555855 FEM1BQ9UK73 627 aa23.2■■□□□ 1.3
FOXN3-211ENST00000555855 UNC80Q8N2C7 3258 aa23.2■■□□□ 1.3
FOXN3-211ENST00000555855 PPIGQ13427 754 aaKnown RBP eCLIP23.19■■□□□ 1.31e-7■■□□□ 11.7
FOXN3-211ENST00000555855 CCSAPQ6IQ19 270 aaPredicted RBP23.19■■□□□ 1.3
FOXN3-211ENST00000555855 MFSD5Q6N075 450 aa23.19■■□□□ 1.3
FOXN3-211ENST00000555855 CHST13Q8NET6 341 aa23.19■■□□□ 1.3
FOXN3-211ENST00000555855 RAVER2Q9HCJ3 691 aaKnown RBP23.19■■□□□ 1.3
FOXN3-211ENST00000555855 SMARCA5O60264 1052 aaPredicted RBP23.18■■□□□ 1.3
FOXN3-211ENST00000555855 APPP05067 770 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 ASGR1P07306 291 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 GNAT2P19087 354 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 DNAJB2P25686 324 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 GNASQ5JWF2 1037 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 KBTBD3Q8NAB2 608 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 MKL1Q969V6 931 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 GPATCH3Q96I76 525 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 SLC38A10Q9HBR0 1119 aa23.18■■□□□ 1.3
FOXN3-211ENST00000555855 CST5P28325 142 aaPredicted RBP23.17■■□□□ 1.3
FOXN3-211ENST00000555855 TDO2P48775 406 aa23.17■■□□□ 1.3
FOXN3-211ENST00000555855 CDK7P50613 346 aa23.17■■□□□ 1.3
FOXN3-211ENST00000555855 GRIN2CQ14957 1233 aa23.17■■□□□ 1.3
FOXN3-211ENST00000555855 CCDC144BQ3MJ40 725 aa23.17■■□□□ 1.3
FOXN3-211ENST00000555855 APPBP2Q92624 585 aa23.17■■□□□ 1.3
FOXN3-211ENST00000555855 ZNF576Q9H609 170 aa23.17■■□□□ 1.3
FOXN3-211ENST00000555855 A0A0U1RQG5 324 aaPredicted RBP23.16■■□□□ 1.3
FOXN3-211ENST00000555855 ARVCFO00192 962 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 TLR3O15455 904 aaKnown RBP23.16■■□□□ 1.3
FOXN3-211ENST00000555855 RNF113AO15541 343 aaKnown RBP23.16■■□□□ 1.3
FOXN3-211ENST00000555855 FDX1P10109 184 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 OAZ1P54368 228 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 GJA9P57773 515 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 CCDC129Q6ZRS4 1044 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.16■■□□□ 1.3
FOXN3-211ENST00000555855 TMEM199Q8N511 208 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 OSBP2Q969R2 916 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 TIFAQ96CG3 184 aa23.16■■□□□ 1.3
FOXN3-211ENST00000555855 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.16■■□□□ 1.35e-6■■■■□ 20.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms