RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 FDX1P10109 184 aa18.28■□□□□ 0.52
SNX6-205ENST00000555648 SLC1A4P43007 532 aa18.28■□□□□ 0.52
SNX6-205ENST00000555648 GJC2Q5T442 439 aaPredicted RBP18.28■□□□□ 0.52
SNX6-205ENST00000555648 CHURC1Q8WUH1 139 aa18.28■□□□□ 0.52
SNX6-205ENST00000555648 RAVER2Q9HCJ3 691 aaKnown RBP18.28■□□□□ 0.52
SNX6-205ENST00000555648 PRKAG2Q9UGJ0 569 aa18.28■□□□□ 0.52
SNX6-205ENST00000555648 PLIN4Q96Q06 1357 aa18.28■□□□□ 0.52
SNX6-205ENST00000555648 IGHA2P01877 340 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 RARBP10826 455 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 STAT2P52630 851 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 ATN1P54259 1190 aaPredicted RBP18.27■□□□□ 0.52
SNX6-205ENST00000555648 MFAP1P55081 439 aaKnown RBP18.27■□□□□ 0.52
SNX6-205ENST00000555648 LRRC26Q2I0M4 334 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 ZNF792Q3KQV3 632 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 FAM160B2Q86V87 743 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 ANKRD35Q8N283 1001 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 TINF2Q9BSI4 451 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 PRO3102Q9H379 93 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 FBXO40Q9UH90 709 aa18.27■□□□□ 0.52
SNX6-205ENST00000555648 TMEM232C9JQI7 657 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 ATP2A1O14983 1001 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 ALX1Q15699 326 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 RRP12Q5JTH9 1297 aaKnown RBP18.26■□□□□ 0.51
SNX6-205ENST00000555648 VPS53Q5VIR6 699 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 CHD1LQ86WJ1 897 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 SMC5Q8IY18 1101 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 CHMP4CQ96CF2 233 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 FAM227BQ96M60 508 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 LBHD1Q9BQE6 289 aaPredicted RBP18.26■□□□□ 0.51
SNX6-205ENST00000555648 SLC38A10Q9HBR0 1119 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 ANAPC4Q9UJX5 808 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
SNX6-205ENST00000555648 MCCP23508 829 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 BMP8BP34820 402 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 MAGEA10P43363 369 aaPredicted RBP18.25■□□□□ 0.51
SNX6-205ENST00000555648 OAZ1P54368 228 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 NMIQ13287 307 aaPredicted RBP18.25■□□□□ 0.51
SNX6-205ENST00000555648 MSL3Q8N5Y2 521 aaKnown RBP18.25■□□□□ 0.51
SNX6-205ENST00000555648 CHST13Q8NET6 341 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 EXOC6Q8TAG9 804 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 STAG1Q8WVM7 1258 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 GMCL1Q96IK5 515 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 GDF15Q99988 308 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 UBE2OQ9C0C9 1292 aaKnown RBP18.25■□□□□ 0.51
SNX6-205ENST00000555648 XPNPEP3Q9NQH7 507 aa18.25■□□□□ 0.51
SNX6-205ENST00000555648 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNX6-205ENST00000555648 A0A0G2JMZ2 1700 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 CEP290O15078 2479 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 A0A0D9SFI3 127 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 AKR1A1P14550 325 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 CCDC96Q2M329 555 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 RNF180Q86T96 592 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 INCENPQ9NQS7 918 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 HOMER2Q9NSB8 354 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 RIPK3Q9Y572 518 aa18.24■□□□□ 0.51
SNX6-205ENST00000555648 ZNF236Q9UL36 1845 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 FOXP2O15409 715 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 ORC4O43929 436 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 FGAP02671 866 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
SNX6-205ENST00000555648 RTP1P59025 263 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 LRRC41Q15345 812 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 ZHX1Q9UKY1 873 aaPredicted RBP18.23■□□□□ 0.51
SNX6-205ENST00000555648 ATP11BQ9Y2G3 1177 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 CCDC171Q6TFL3 1326 aa18.23■□□□□ 0.51
SNX6-205ENST00000555648 NMT2O60551 498 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 IGHDP01880 384 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 ADCYAP1R1P41586 468 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 NUCB1Q02818 461 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 RCSD1Q6JBY9 416 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 KCTD1Q719H9 257 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 ACAD9Q9H845 621 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 FAM184BQ9ULE4 1060 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 SYNGAP1Q96PV0 1343 aa18.22■□□□□ 0.51
SNX6-205ENST00000555648 RLFQ13129 1914 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 HIP1O00291 1037 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 SDSP20132 328 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 HAND2P61296 217 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 MDM2Q00987 491 aaPredicted RBP18.21■□□□□ 0.51
SNX6-205ENST00000555648 TKFCQ3LXA3 575 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 SLC39A5Q6ZMH5 540 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 MFSD6Q6ZSS7 791 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 ZNF467Q7Z7K2 595 aaPredicted RBP18.21■□□□□ 0.51
SNX6-205ENST00000555648 PLEKHM2Q8IWE5 1019 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 RNF41Q9H4P4 317 aaPredicted RBP18.21■□□□□ 0.51
SNX6-205ENST00000555648 IL17RBQ9NRM6 502 aa18.21■□□□□ 0.51
SNX6-205ENST00000555648 POTEB2H3BUK9 544 aa18.2■□□□□ 0.5
SNX6-205ENST00000555648 PLA2G6O60733 806 aa18.2■□□□□ 0.5
SNX6-205ENST00000555648 PGK1P00558 417 aa18.2■□□□□ 0.5
SNX6-205ENST00000555648 ZNF865P0CJ78 1059 aaPredicted RBP18.2■□□□□ 0.5
SNX6-205ENST00000555648 TOP1P11387 765 aaKnown RBP18.2■□□□□ 0.5
SNX6-205ENST00000555648 PCP11498 1178 aaKnown RBP18.2■□□□□ 0.5
SNX6-205ENST00000555648 TAL1P17542 331 aaPredicted RBP18.2■□□□□ 0.5
SNX6-205ENST00000555648 CCDC174Q6PII3 467 aa18.2■□□□□ 0.5
SNX6-205ENST00000555648 ZNF589Q86UQ0 364 aaPredicted RBP18.2■□□□□ 0.5
SNX6-205ENST00000555648 TDHQ8IZJ6 230 aa18.2■□□□□ 0.5
SNX6-205ENST00000555648 DCAF4Q8WV16 495 aa18.2■□□□□ 0.5
SNX6-205ENST00000555648 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms