RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 GH2P01242 217 aa13.44□□□□□ -0.26
IFT43-210ENST00000555370 PARP1P09874 1014 aaKnown RBP13.44□□□□□ -0.26
IFT43-210ENST00000555370 GUCY1A2P33402 732 aa13.44□□□□□ -0.26
IFT43-210ENST00000555370 RRP1BQ14684 758 aaKnown RBP13.44□□□□□ -0.26
IFT43-210ENST00000555370 SHROOM1Q2M3G4 852 aaPredicted RBP13.44□□□□□ -0.26
IFT43-210ENST00000555370 ASPRV1Q53RT3 343 aa13.44□□□□□ -0.26
IFT43-210ENST00000555370 DCAF15Q66K64 600 aa13.44□□□□□ -0.26
IFT43-210ENST00000555370 CMTR1Q8N1G2 835 aaKnown RBP13.44□□□□□ -0.26
IFT43-210ENST00000555370 SYMPKQ92797 1274 aaKnown RBP13.44□□□□□ -0.26
IFT43-210ENST00000555370 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
IFT43-210ENST00000555370 ZBTB21Q9ULJ3 1066 aa13.44□□□□□ -0.26
IFT43-210ENST00000555370 SCAF8Q9UPN6 1271 aaKnown RBP13.44□□□□□ -0.26
IFT43-210ENST00000555370 DDX11L8A8MPP1 907 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 TNFRSF10AO00220 468 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 EEF2P13639 858 aaKnown RBP13.43□□□□□ -0.26
IFT43-210ENST00000555370 MCM4P33991 863 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 ATP2B2Q01814 1243 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 MIGA2Q7L4E1 593 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 CCDC82Q8N4S0 544 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 SRBD1Q8N5C6 995 aaKnown RBP13.43□□□□□ -0.26
IFT43-210ENST00000555370 FBXO18Q8NFZ0 1043 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 MKL1Q969V6 931 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 DCPSQ96C86 337 aaKnown RBP13.43□□□□□ -0.26
IFT43-210ENST00000555370 SYNPO2Q9UMS6 1093 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 MTMR7Q9Y216 660 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 PARP14Q460N5 1801 aa13.43□□□□□ -0.26
IFT43-210ENST00000555370 SYNGAP1Q96PV0 1343 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 SSC5DA1L4H1 1573 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 USP17L5A8MUK1 530 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 GOLGA6L22H0YM25 854 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 SNHG28P0DPA3 235 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 PDHBP11177 359 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 PTMSP20962 102 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 CAP2P40123 477 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 JAG1P78504 1218 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 MKRN3Q13064 507 aaKnown RBP13.42□□□□□ -0.26
IFT43-210ENST00000555370 RESTQ13127 1097 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 TRIM29Q14134 588 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 CD99L2Q8TCZ2 262 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 AIFM3Q96NN9 605 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 HTATIP2Q9BUP3 242 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 SPZ1Q9BXG8 430 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
IFT43-210ENST00000555370 EFCC1Q9HA90 598 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 GINM1Q9NU53 330 aa13.42□□□□□ -0.26
IFT43-210ENST00000555370 PTPRFP10586 1907 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 KLRF2D3W0D1 207 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 SMARCA1P28370 1054 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 GUCY1B3Q02153 619 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 SLC9C1Q4G0N8 1177 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 NBPF12Q5TAG4 269 aaPredicted RBP13.41□□□□□ -0.26
IFT43-210ENST00000555370 KRT40Q6A162 431 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 RASGRP2Q7LDG7 609 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 FERMT3Q86UX7 667 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 GMCL1P1Q8NEA9 526 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 ERO1AQ96HE7 468 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 ZNF341Q9BYN7 854 aa13.41□□□□□ -0.26
IFT43-210ENST00000555370 PHF20L1A8MW92 1017 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 UBE2Q2LH0YL09 131 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 ASNSP08243 561 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 GOLGA8HP0CJ92 632 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 XBP1P17861 261 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 ZNF543Q08ER8 600 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 SREBF2Q12772 1141 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 PKN1Q16512 942 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 CCDC96Q2M329 555 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 GPATCH4Q5T3I0 446 aaKnown RBP13.4□□□□□ -0.26
IFT43-210ENST00000555370 SLFN13Q68D06 897 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 MCTP1Q6DN14 999 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 USP17L2Q6R6M4 530 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 SIAH1Q8IUQ4 282 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 CDCA5Q96FF9 252 aa13.4□□□□□ -0.26
IFT43-210ENST00000555370 V9GY48 417 aaPredicted RBP13.4□□□□□ -0.26
IFT43-210ENST00000555370 FRMPD2Q68DX3 1309 aaPredicted RBP13.39□□□□□ -0.27
IFT43-210ENST00000555370 CTNND1O60716 968 aaKnown RBP13.39□□□□□ -0.27
IFT43-210ENST00000555370 SCG2P13521 617 aa13.39□□□□□ -0.27
IFT43-210ENST00000555370 NBR1Q14596 966 aa13.39□□□□□ -0.27
IFT43-210ENST00000555370 PFKFB3Q16875 520 aaPredicted RBP13.39□□□□□ -0.27
IFT43-210ENST00000555370 SUPT20HL1Q3ZLR7 823 aa13.39□□□□□ -0.27
IFT43-210ENST00000555370 OTUD7BQ6GQQ9 843 aa13.39□□□□□ -0.27
IFT43-210ENST00000555370 SULF1Q8IWU6 871 aa13.39□□□□□ -0.27
IFT43-210ENST00000555370 SH2D4AQ9H788 454 aa13.39□□□□□ -0.27
IFT43-210ENST00000555370 ZNF112Q9UJU3 913 aa13.39□□□□□ -0.27
IFT43-210ENST00000555370 PIEZO1Q92508 2521 aa13.39□□□□□ -0.27
IFT43-210ENST00000555370 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 CYTH3O43739 400 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 MMP1P03956 469 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 SLC1A4P43007 532 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 SAFBQ15424 915 aaKnown RBP eCLIP13.38□□□□□ -0.27
IFT43-210ENST00000555370 SLC35G1Q2M3R5 365 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 FOXD4L6Q3SYB3 417 aaPredicted RBP13.38□□□□□ -0.27
IFT43-210ENST00000555370 FOXD4L3Q6VB84 417 aaPredicted RBP13.38□□□□□ -0.27
IFT43-210ENST00000555370 MOB2Q70IA6 237 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 BRAPQ7Z569 592 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 RRP36Q96EU6 259 aaKnown RBP13.38□□□□□ -0.27
IFT43-210ENST00000555370 GMCL1Q96IK5 515 aa13.38□□□□□ -0.27
IFT43-210ENST00000555370 CHAMP1Q96JM3 812 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms