RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 MTMR6Q9Y217 621 aa20.41■□□□□ 0.86
PSEN1-212ENST00000555254 GOLGA6L22H0YM25 854 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 GPR25O00155 361 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 PARP1P09874 1014 aaKnown RBP20.4■□□□□ 0.86
PSEN1-212ENST00000555254 HMGCS2P54868 508 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 NTRK3Q16288 839 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 TMTC3Q6ZXV5 915 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 ANKRD23Q86SG2 305 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 RGS22Q8NE09 1264 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 PHKBQ93100 1093 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 ALG1Q9BT22 464 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 WDR18Q9BV38 432 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 ZFYVE28Q9HCC9 887 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 RBM27Q9P2N5 1060 aaKnown RBP20.4■□□□□ 0.86
PSEN1-212ENST00000555254 ZDHHC9Q9Y397 364 aa20.4■□□□□ 0.86
PSEN1-212ENST00000555254 SIPA1L1O43166 1804 aa20.39■□□□□ 0.86
PSEN1-212ENST00000555254 PPFIA3O75145 1194 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 DEXIO95424 95 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 FDPSP14324 419 aaKnown RBP20.39■□□□□ 0.85
PSEN1-212ENST00000555254 XBP1P17861 261 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 ICA1Q05084 483 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 DGKZQ13574 1117 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 MTMR2Q13614 643 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 SEPT2Q15019 361 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 GPAT2Q6NUI2 795 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 CCDC82Q8N4S0 544 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 RNF26Q9BY78 433 aaPredicted RBP20.39■□□□□ 0.85
PSEN1-212ENST00000555254 ARHGEF10LQ9HCE6 1279 aa20.39■□□□□ 0.85
PSEN1-212ENST00000555254 PRPF3O43395 683 aaKnown RBP20.38■□□□□ 0.85
PSEN1-212ENST00000555254 F13A1P00488 732 aa20.38■□□□□ 0.85
PSEN1-212ENST00000555254 FOSBP53539 338 aa20.38■□□□□ 0.85
PSEN1-212ENST00000555254 ZYXQ15942 572 aaKnown RBP20.38■□□□□ 0.85
PSEN1-212ENST00000555254 ZNF296Q8WUU4 475 aaPredicted RBP20.38■□□□□ 0.85
PSEN1-212ENST00000555254 MKL1Q969V6 931 aa20.38■□□□□ 0.85
PSEN1-212ENST00000555254 FEZ1Q99689 392 aa20.38■□□□□ 0.85
PSEN1-212ENST00000555254 TMOD4Q9NZQ9 345 aa20.38■□□□□ 0.85
PSEN1-212ENST00000555254 USP17L10C9JJH3 530 aa20.37■□□□□ 0.85
PSEN1-212ENST00000555254 EEF2P13639 858 aaKnown RBP20.37■□□□□ 0.85
PSEN1-212ENST00000555254 PTMSP20962 102 aa20.37■□□□□ 0.85
PSEN1-212ENST00000555254 GUCY1A2P33402 732 aa20.37■□□□□ 0.85
PSEN1-212ENST00000555254 BACE1P56817 501 aa20.37■□□□□ 0.85
PSEN1-212ENST00000555254 ASPRV1Q53RT3 343 aa20.37■□□□□ 0.85
PSEN1-212ENST00000555254 LRRC47Q8N1G4 583 aaKnown RBP20.37■□□□□ 0.85
PSEN1-212ENST00000555254 CFHR5Q9BXR6 569 aa20.37■□□□□ 0.85
PSEN1-212ENST00000555254 ZSCAN16Q9H4T2 348 aaPredicted RBP20.37■□□□□ 0.85
PSEN1-212ENST00000555254 ZCCHC17Q9NP64 241 aaKnown RBP20.37■□□□□ 0.85
PSEN1-212ENST00000555254 V9GY48 417 aaPredicted RBP20.37■□□□□ 0.85
PSEN1-212ENST00000555254 PALM3A6NDB9 673 aaPredicted RBP20.36■□□□□ 0.85
PSEN1-212ENST00000555254 FKTNO75072 461 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 PLEKHA8P1O95397 391 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 CYP2C8P10632 490 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 NFKBIBQ15653 356 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 TREML2Q5T2D2 321 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 MCTP1Q6DN14 999 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 CLEC17AQ6ZS10 378 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 ACER1Q8TDN7 264 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 SH2D4AQ9H788 454 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
PSEN1-212ENST00000555254 SYNPO2Q9UMS6 1093 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 DOCK1Q14185 1865 aa20.36■□□□□ 0.85
PSEN1-212ENST00000555254 DDX11L8A8MPP1 907 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 C19orf81C9J6K1 198 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 KLRF2D3W0D1 207 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 RAD21O60216 631 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 BAG4O95429 457 aaKnown RBP20.35■□□□□ 0.85
PSEN1-212ENST00000555254 SMARCA1P28370 1054 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 SOX10P56693 466 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 SAFBQ15424 915 aaKnown RBP eCLIP20.35■□□□□ 0.85
PSEN1-212ENST00000555254 CCDC96Q2M329 555 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 NBPF11Q86T75 865 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 CMTR1Q8N1G2 835 aaKnown RBP20.35■□□□□ 0.85
PSEN1-212ENST00000555254 SRBD1Q8N5C6 995 aaKnown RBP20.35■□□□□ 0.85
PSEN1-212ENST00000555254 DCAF4Q8WV16 495 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 MAD2L2Q9UI95 211 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 AGTPBP1Q9UPW5 1226 aa20.35■□□□□ 0.85
PSEN1-212ENST00000555254 MCM4P33991 863 aa20.34■□□□□ 0.85
PSEN1-212ENST00000555254 GNL2Q13823 731 aaKnown RBP20.34■□□□□ 0.85
PSEN1-212ENST00000555254 SH3D19Q5HYK7 790 aa20.34■□□□□ 0.85
PSEN1-212ENST00000555254 GPATCH4Q5T3I0 446 aaKnown RBP20.34■□□□□ 0.85
PSEN1-212ENST00000555254 SLFN13Q68D06 897 aa20.34■□□□□ 0.85
PSEN1-212ENST00000555254 USP17L2Q6R6M4 530 aa20.34■□□□□ 0.85
PSEN1-212ENST00000555254 CLEC10AQ8IUN9 316 aa20.34■□□□□ 0.85
PSEN1-212ENST00000555254 PROCA1Q8NCQ7 364 aaPredicted RBP20.34■□□□□ 0.85
PSEN1-212ENST00000555254 FBXO18Q8NFZ0 1043 aa20.34■□□□□ 0.85
PSEN1-212ENST00000555254 PARK7Q99497 189 aaKnown RBP20.34■□□□□ 0.85
PSEN1-212ENST00000555254 CPA4Q9UI42 421 aa20.34■□□□□ 0.85
PSEN1-212ENST00000555254 TLR2O60603 784 aa20.33■□□□□ 0.85
PSEN1-212ENST00000555254 PDHBP11177 359 aa20.33■□□□□ 0.85
PSEN1-212ENST00000555254 GUCY1B3Q02153 619 aa20.33■□□□□ 0.85
PSEN1-212ENST00000555254 FUT2Q10981 343 aa20.33■□□□□ 0.85
PSEN1-212ENST00000555254 STAG2Q8N3U4 1231 aa20.33■□□□□ 0.85
PSEN1-212ENST00000555254 EMILIN3Q9NT22 766 aa20.33■□□□□ 0.85
PSEN1-212ENST00000555254 ECM2O94769 699 aaPredicted RBP20.32■□□□□ 0.84
PSEN1-212ENST00000555254 OSBPP22059 807 aa20.32■□□□□ 0.84
PSEN1-212ENST00000555254 SP3Q02447 781 aa20.32■□□□□ 0.84
PSEN1-212ENST00000555254 PABPC4Q13310 644 aaKnown RBP eCLIP20.32■□□□□ 0.84
PSEN1-212ENST00000555254 CSPP1Q1MSJ5 1256 aa20.32■□□□□ 0.84
PSEN1-212ENST00000555254 NOM1Q5C9Z4 860 aaKnown RBP20.32■□□□□ 0.84
PSEN1-212ENST00000555254 FERMT3Q86UX7 667 aa20.32■□□□□ 0.84
PSEN1-212ENST00000555254 GMCL1P1Q8NEA9 526 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms