RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 ATP2B2Q01814 1243 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 TCP10Q12799 353 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 DCAF8Q5TAQ9 597 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 C16orf86Q6ZW13 317 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 CCDC150Q8NCX0 1101 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 TMEM60Q9H2L4 133 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 IGSF3O75054 1194 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 AKR1B1P15121 316 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 CD44P16070 742 aaKnown RBP16.84■□□□□ 0.29
XRCC3-211ENST00000555055 CHRNA5P30532 468 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 BMS1Q14692 1282 aaKnown RBP16.84■□□□□ 0.29
XRCC3-211ENST00000555055 DDX60LQ5H9U9 1706 aaKnown RBP16.84■□□□□ 0.29
XRCC3-211ENST00000555055 KIAA0825Q8IV33 1275 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 SP8Q8IXZ3 490 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
XRCC3-211ENST00000555055 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.29
XRCC3-211ENST00000555055 PAGE5Q96GU1 130 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 CALCOCO1Q9P1Z2 691 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 MAPK8IP1Q9UQF2 711 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 ANKRD31Q8N7Z5 1873 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 ROBO3Q96MS0 1386 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 ATP2C1P98194 919 aaPredicted RBP16.83■□□□□ 0.28
XRCC3-211ENST00000555055 SLC20A2Q08357 652 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 PIGSQ96S52 555 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 USP40Q9NVE5 1235 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 PCDHA6Q9UN73 950 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 PCDHA8Q9Y5H6 950 aa16.83■□□□□ 0.28
XRCC3-211ENST00000555055 KLRG2A4D1S0 409 aaPredicted RBP16.82■□□□□ 0.28
XRCC3-211ENST00000555055 KARSQ15046 597 aaKnown RBP16.82■□□□□ 0.28
XRCC3-211ENST00000555055 ELF2Q15723 593 aa16.82■□□□□ 0.28
XRCC3-211ENST00000555055 CCDC93Q567U6 631 aa16.82■□□□□ 0.28
XRCC3-211ENST00000555055 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
XRCC3-211ENST00000555055 ZNF579Q8NAF0 562 aaKnown RBP16.82■□□□□ 0.28
XRCC3-211ENST00000555055 AKT1S1Q96B36 256 aa16.82■□□□□ 0.28
XRCC3-211ENST00000555055 MTRQ99707 1265 aa16.82■□□□□ 0.28
XRCC3-211ENST00000555055 INTS13Q9NVM9 706 aa16.82■□□□□ 0.28
XRCC3-211ENST00000555055 PCDHA4Q9UN74 947 aa16.82■□□□□ 0.28
XRCC3-211ENST00000555055 PALM3A6NDB9 673 aaPredicted RBP16.82■□□□□ 0.28
XRCC3-211ENST00000555055 STXBP3O00186 592 aa16.82■□□□□ 0.28
XRCC3-211ENST00000555055 PDGFDQ9GZP0 370 aaPredicted RBP16.82■□□□□ 0.28
XRCC3-211ENST00000555055 GAKO14976 1311 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 IKBKBO14920 756 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 SARSP49591 514 aaKnown RBP16.81■□□□□ 0.28
XRCC3-211ENST00000555055 TPM4P67936 248 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 MORC3Q14149 939 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 NLGN1Q8N2Q7 840 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 GPCPD1Q9NPB8 672 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 MPHOSPH10O00566 681 aaKnown RBP16.81■□□□□ 0.28
XRCC3-211ENST00000555055 CCP110O43303 1012 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 PARP1P09874 1014 aaKnown RBP16.81■□□□□ 0.28
XRCC3-211ENST00000555055 NAPAP54920 295 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 DPYDQ12882 1025 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 NEDD1Q8NHV4 660 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 COA7Q96BR5 231 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 TMEM260Q9NX78 707 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 PARP3Q9Y6F1 533 aa16.81■□□□□ 0.28
XRCC3-211ENST00000555055 MYH1P12882 1939 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 CDK11BP21127 795 aaKnown RBP16.8■□□□□ 0.28
XRCC3-211ENST00000555055 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
XRCC3-211ENST00000555055 CUL4BQ13620 913 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 TBC1D22AQ8WUA7 517 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 BIN2Q9UBW5 565 aaPredicted RBP16.8■□□□□ 0.28
XRCC3-211ENST00000555055 NRDCO43847 1150 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 SLC16A2P36021 539 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 LETM2Q2VYF4 491 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 JAKMIP3Q5VZ66 844 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 COA1Q9GZY4 146 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 ZNF446Q9NWS9 450 aa16.8■□□□□ 0.28
XRCC3-211ENST00000555055 NPR1P16066 1061 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 CDC42EP5Q6NZY7 148 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 ANKS1AQ92625 1134 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 TMEM51Q9NW97 253 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 BARHL2Q9NY43 387 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 HOOK1Q9UJC3 728 aaKnown RBP16.79■□□□□ 0.28
XRCC3-211ENST00000555055 ATP8B1O43520 1251 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 C4orf32Q8N8J7 132 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 RASSF8Q8NHQ8 419 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 FERMT2Q96AC1 680 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 EEF2KMTQ96G04 330 aa16.79■□□□□ 0.28
XRCC3-211ENST00000555055 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 M0R2N6 131 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 PLCG2P16885 1265 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 LRRC15Q8TF66 581 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 SRRTQ9BXP5 876 aaKnown RBP16.78■□□□□ 0.28
XRCC3-211ENST00000555055 TCP11L1Q9NUJ3 509 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 PHLPP2Q6ZVD8 1323 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 SFPQP23246 707 aaKnown RBP eCLIP16.78■□□□□ 0.28
XRCC3-211ENST00000555055 CYP2C19P33261 490 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 NT5DC1Q5TFE4 455 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 E4F1Q66K89 784 aaPredicted RBP16.78■□□□□ 0.28
XRCC3-211ENST00000555055 C2CD5Q86YS7 1000 aa16.78■□□□□ 0.28
XRCC3-211ENST00000555055 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
XRCC3-211ENST00000555055 PDHBP11177 359 aa16.77■□□□□ 0.28
XRCC3-211ENST00000555055 CALML3P27482 149 aa16.77■□□□□ 0.28
XRCC3-211ENST00000555055 E2F4Q16254 413 aa16.77■□□□□ 0.28
XRCC3-211ENST00000555055 APOBEC3HQ6NTF7 200 aaKnown RBP16.77■□□□□ 0.28
XRCC3-211ENST00000555055 KCTD1Q719H9 257 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms