RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 HOXD10P28358 340 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 MAPK4P31152 587 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 TRIM32Q13049 653 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 MORN1Q5T089 497 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 CASC1Q6TDU7 716 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 IQCA1Q86XH1 822 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 MB21D1Q8N884 522 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 PRPF38AQ8NAV1 312 aaKnown RBP14.52□□□□□ -0.09
SYNE2-214ENST00000554928 PNMA1Q8ND90 353 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 NCOA7Q8NI08 942 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 RAET1EQ8TD07 263 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 DCAF4Q8WV16 495 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 ARMC5Q96C12 935 aa14.52□□□□□ -0.09
SYNE2-214ENST00000554928 RAVER2Q9HCJ3 691 aaKnown RBP14.52□□□□□ -0.09
SYNE2-214ENST00000554928 ZNF536O15090 1300 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 PTPREP23469 700 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 PRMT2P55345 433 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 SOX10P56693 466 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 TRDNQ13061 729 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 MTFR1Q15390 333 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 CCL14Q16627 93 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 ADCK5Q3MIX3 580 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 SLC9C1Q4G0N8 1177 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 IFFO2Q5TF58 517 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 RALYLQ86SE5 291 aaKnown RBP14.51□□□□□ -0.09
SYNE2-214ENST00000554928 NCAPG2Q86XI2 1143 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 CPXCR1Q8N123 301 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 ZNF333Q96JL9 665 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 UBAC1Q9BSL1 405 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 LRRC2Q9BYS8 371 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 SLC38A10Q9HBR0 1119 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 PRR12Q9ULL5 1215 aa14.51□□□□□ -0.09
SYNE2-214ENST00000554928 COL11A1P12107 1806 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-214ENST00000554928 IFIT3O14879 490 aaKnown RBP14.5□□□□□ -0.09
SYNE2-214ENST00000554928 ADCY3O60266 1144 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 GRK4P32298 578 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 STAT3P40763 770 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 SLC4A3P48751 1232 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.093e-6■■■■□ 25.3
SYNE2-214ENST00000554928 STAT2P52630 851 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 CCNA1P78396 465 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 IKQ13123 557 aaPredicted RBP14.5□□□□□ -0.09
SYNE2-214ENST00000554928 IRF5Q13568 498 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 CCDC174Q6PII3 467 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 RIOX2Q8IUF8 465 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 CCAR1Q8IX12 1150 aaKnown RBP14.5□□□□□ -0.09
SYNE2-214ENST00000554928 SHCBP1Q8NEM2 672 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 NPLOC4Q8TAT6 608 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 IGDCC4Q8TDY8 1250 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 TCEANC2Q96MN5 208 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 KAT14Q9H8E8 782 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 FLRT1Q9NZU1 646 aa14.5□□□□□ -0.09
SYNE2-214ENST00000554928 PRC1O43663 620 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 COBLO75128 1261 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 CPA1P15085 419 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 GRB14Q14449 540 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 SLC35G1Q2M3R5 365 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 IFIT1BQ5T764 474 aaKnown RBP14.49□□□□□ -0.09
SYNE2-214ENST00000554928 SYDE2Q5VT97 1194 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 SNRNP48Q6IEG0 339 aaKnown RBP14.49□□□□□ -0.09
SYNE2-214ENST00000554928 BTNL9Q6UXG8 535 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 FAM160B2Q86V87 743 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 STAG2Q8N3U4 1231 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 TRIB2Q92519 343 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 AGBL1Q96MI9 1066 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 NUDT12Q9BQG2 462 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 SSUH2Q9Y2M2 353 aa14.49□□□□□ -0.09
SYNE2-214ENST00000554928 BRCA2P51587 3418 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 POTEFA5A3E0 1075 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 SLC15A5A6NIM6 579 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 PLA2G6O60733 806 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 ZBED4O75132 1171 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 INHAP05111 366 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 ADORA2AP29274 412 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 HSPA4P34932 840 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 NT5C2P49902 561 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 MAP2K5Q13163 448 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 CCDC178Q5BJE1 867 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 TMEM67Q5HYA8 995 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 CHURC1Q8WUH1 139 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 KCNB2Q92953 911 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 MYL10Q9BUA6 226 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 LY9Q9HBG7 655 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 CWC22Q9HCG8 908 aaKnown RBP14.48□□□□□ -0.09
SYNE2-214ENST00000554928 SNX14Q9Y5W7 946 aa14.48□□□□□ -0.09
SYNE2-214ENST00000554928 SH2B2O14492 632 aaPredicted RBP14.47□□□□□ -0.09
SYNE2-214ENST00000554928 ATP2A1O14983 1001 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 PGK2P07205 417 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 WTAPQ15007 396 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 RAB11FIP4Q86YS3 637 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 SLAIN1Q8ND83 568 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 SOCS4Q8WXH5 440 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 TEX13BQ9BXU2 312 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 UNC93B1Q9H1C4 597 aa14.47□□□□□ -0.09
SYNE2-214ENST00000554928 RANBP17Q9H2T7 1088 aaKnown RBP14.47□□□□□ -0.09
SYNE2-214ENST00000554928 MROH8Q9H579 483 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms