RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 IGF2BP3O00425 579 aaKnown RBP eCLIP17.25■□□□□ 0.35
PSMA6-208ENST00000554843 DHX16O60231 1041 aaKnown RBP17.25■□□□□ 0.35
PSMA6-208ENST00000554843 AOC2O75106 756 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 FLOT1O75955 427 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 PLEKHA8P1O95397 391 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 OSBPP22059 807 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 TM4SF4P48230 202 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 VEGFBP49765 207 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 CCT2P78371 535 aaKnown RBP17.25■□□□□ 0.35
PSMA6-208ENST00000554843 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
PSMA6-208ENST00000554843 STK3Q13188 491 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 SYDE2Q5VT97 1194 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 TTBK2Q6IQ55 1244 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 CPLX2Q6PUV4 134 aaKnown RBP17.25■□□□□ 0.35
PSMA6-208ENST00000554843 LBX2Q6XYB7 198 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 IFNL1Q8IU54 200 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 ZIC5Q96T25 663 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
PSMA6-208ENST00000554843 ASCC2Q9H1I8 757 aaPredicted RBP17.25■□□□□ 0.35
PSMA6-208ENST00000554843 NCOA5Q9HCD5 579 aaKnown RBP17.25■□□□□ 0.35
PSMA6-208ENST00000554843 FBXO28Q9NVF7 368 aa17.25■□□□□ 0.35
PSMA6-208ENST00000554843 SPDYE16A6NNV3 312 aaPredicted RBP17.24■□□□□ 0.35
PSMA6-208ENST00000554843 FDX1P10109 184 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 IFNAR1P17181 557 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 DSG3P32926 999 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 ADD1P35611 737 aaKnown RBP17.24■□□□□ 0.35
PSMA6-208ENST00000554843 FUT2Q10981 343 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 IKQ13123 557 aaPredicted RBP17.24■□□□□ 0.35
PSMA6-208ENST00000554843 COG2Q14746 738 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 NTRK3Q16288 839 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 GTF3C2Q8WUA4 911 aaPredicted RBP17.24■□□□□ 0.35
PSMA6-208ENST00000554843 RIOX1Q9H6W3 641 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 PRR12Q9ULL5 1215 aa17.24■□□□□ 0.35
PSMA6-208ENST00000554843 PDHXO00330 501 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 CPLX1O14810 134 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 CYTH3O43739 400 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 CDKL5O76039 1030 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 CUL4AQ13619 759 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 NBPF11Q86T75 865 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 SRBD1Q8N5C6 995 aaKnown RBP17.23■□□□□ 0.35
PSMA6-208ENST00000554843 NECAB1Q8N987 351 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 PRPF38AQ8NAV1 312 aaKnown RBP17.23■□□□□ 0.35
PSMA6-208ENST00000554843 MTMR8Q96EF0 704 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 ADAMTS5Q9UNA0 930 aa17.23■□□□□ 0.35
PSMA6-208ENST00000554843 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 ALDH1A1P00352 501 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 SLC16A2P36021 539 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 HERVK_113P62684 666 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 KIFC2Q96AC6 838 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 ATG4CQ96DT6 458 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
PSMA6-208ENST00000554843 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
PSMA6-208ENST00000554843 RANBP17Q9H2T7 1088 aaKnown RBP17.22■□□□□ 0.35
PSMA6-208ENST00000554843 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 HOXC10Q9NYD6 342 aa17.22■□□□□ 0.35
PSMA6-208ENST00000554843 RBM27Q9P2N5 1060 aaKnown RBP17.22■□□□□ 0.35
PSMA6-208ENST00000554843 ADGRA2Q96PE1 1338 aa17.21■□□□□ 0.35
PSMA6-208ENST00000554843 BAZ2BQ9UIF8 2168 aaKnown RBP17.21■□□□□ 0.35
PSMA6-208ENST00000554843 ANP32AP39687 249 aaKnown RBP17.21■□□□□ 0.35
PSMA6-208ENST00000554843 BECN1Q14457 450 aa17.21■□□□□ 0.35
PSMA6-208ENST00000554843 ADGRF4Q8IZF3 695 aa17.21■□□□□ 0.35
PSMA6-208ENST00000554843 MB21D1Q8N884 522 aa17.21■□□□□ 0.35
PSMA6-208ENST00000554843 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
PSMA6-208ENST00000554843 REPS2Q8NFH8 660 aa17.21■□□□□ 0.35
PSMA6-208ENST00000554843 JMJD4Q9H9V9 463 aa17.21■□□□□ 0.35
PSMA6-208ENST00000554843 COL11A1P12107 1806 aaPredicted RBP17.2■□□□□ 0.34
PSMA6-208ENST00000554843 VWA5AO00534 786 aa17.2■□□□□ 0.34
PSMA6-208ENST00000554843 CTDNEP1O95476 244 aa17.2■□□□□ 0.34
PSMA6-208ENST00000554843 GCLCP48506 637 aaPredicted RBP17.2■□□□□ 0.34
PSMA6-208ENST00000554843 TAF1CQ15572 869 aaPredicted RBP17.2■□□□□ 0.34
PSMA6-208ENST00000554843 CDC37Q16543 378 aaPredicted RBP17.2■□□□□ 0.34
PSMA6-208ENST00000554843 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
PSMA6-208ENST00000554843 SMARCC2Q8TAQ2 1214 aa17.2■□□□□ 0.34
PSMA6-208ENST00000554843 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
PSMA6-208ENST00000554843 P2RX7Q99572 595 aaKnown RBP17.2■□□□□ 0.34
PSMA6-208ENST00000554843 SLC38A10Q9HBR0 1119 aa17.2■□□□□ 0.34
PSMA6-208ENST00000554843 PNMA2Q9UL42 364 aa17.2■□□□□ 0.34
PSMA6-208ENST00000554843 MYH6P13533 1939 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 PTPDC1A2A3K4 754 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 ZBTB5O15062 677 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 PRPF3O43395 683 aaKnown RBP17.19■□□□□ 0.34
PSMA6-208ENST00000554843 FMNL1O95466 1100 aaPredicted RBP17.19■□□□□ 0.34
PSMA6-208ENST00000554843 CYP2C8P10632 490 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 OAZ1P54368 228 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 TRIM22Q8IYM9 498 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 RRP36Q96EU6 259 aaKnown RBP17.19■□□□□ 0.34
PSMA6-208ENST00000554843 INTS4Q96HW7 963 aaKnown RBP17.19■□□□□ 0.34
PSMA6-208ENST00000554843 PIGSQ96S52 555 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 CFHR5Q9BXR6 569 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 SEC63Q9UGP8 760 aaKnown RBP17.19■□□□□ 0.34
PSMA6-208ENST00000554843 RABGAP1Q9Y3P9 1069 aa17.19■□□□□ 0.34
PSMA6-208ENST00000554843 ATP2A1O14983 1001 aa17.18■□□□□ 0.34
PSMA6-208ENST00000554843 CA12O43570 354 aa17.18■□□□□ 0.34
PSMA6-208ENST00000554843 ZBED4O75132 1171 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms