RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TMEM265A0A087WTH1 108 aa28.99■■■□□ 2.23
FOXA1-204ENST00000554607 ADAMTS4O75173 837 aa28.99■■■□□ 2.23
FOXA1-204ENST00000554607 SNRNP48Q6IEG0 339 aaKnown RBP28.99■■■□□ 2.23
FOXA1-204ENST00000554607 PRPF38AQ8NAV1 312 aaKnown RBP28.99■■■□□ 2.23
FOXA1-204ENST00000554607 MAFAQ8NHW3 353 aaPredicted RBP28.99■■■□□ 2.23
FOXA1-204ENST00000554607 STRBPQ96SI9 672 aaKnown RBP28.99■■■□□ 2.23
FOXA1-204ENST00000554607 MOXD2PA6NHM9 499 aa28.98■■■□□ 2.23
FOXA1-204ENST00000554607 F5H6K3 240 aa28.98■■■□□ 2.23
FOXA1-204ENST00000554607 ITGB8P26012 769 aa28.98■■■□□ 2.23
FOXA1-204ENST00000554607 KLRC3Q07444 240 aa28.98■■■□□ 2.23
FOXA1-204ENST00000554607 ANKRD33Q7Z3H0 272 aa28.98■■■□□ 2.23
FOXA1-204ENST00000554607 TTYH1Q9H313 450 aaPredicted RBP28.98■■■□□ 2.23
FOXA1-204ENST00000554607 STARD7Q9NQZ5 370 aa28.98■■■□□ 2.23
FOXA1-204ENST00000554607 CTDP1Q9Y5B0 961 aaPredicted RBP28.98■■■□□ 2.23
FOXA1-204ENST00000554607 DCDC2CA8MYV0 355 aa28.97■■■□□ 2.23
FOXA1-204ENST00000554607 RASA1P20936 1047 aa28.97■■■□□ 2.23
FOXA1-204ENST00000554607 ACLYP53396 1101 aa28.97■■■□□ 2.23
FOXA1-204ENST00000554607 FPGSQ05932 587 aa28.97■■■□□ 2.23
FOXA1-204ENST00000554607 MAMDC4Q6UXC1 1216 aa28.97■■■□□ 2.23
FOXA1-204ENST00000554607 NUP88Q99567 741 aaPredicted RBP28.97■■■□□ 2.23
FOXA1-204ENST00000554607 ATP2A1O14983 1001 aa28.96■■■□□ 2.23
FOXA1-204ENST00000554607 ZBED4O75132 1171 aa28.96■■■□□ 2.23
FOXA1-204ENST00000554607 ZNF467Q7Z7K2 595 aaPredicted RBP28.96■■■□□ 2.23
FOXA1-204ENST00000554607 MYLIPQ8WY64 445 aa28.96■■■□□ 2.23
FOXA1-204ENST00000554607 ZNF287Q9HBT7 754 aa28.96■■■□□ 2.23
FOXA1-204ENST00000554607 ECHDC1Q9NTX5 307 aa28.96■■■□□ 2.23
FOXA1-204ENST00000554607 SYNRGQ9UMZ2 1314 aa28.95■■■□□ 2.23
FOXA1-204ENST00000554607 DNAJC25-GNG10A0A024R161 153 aa28.95■■■□□ 2.22
FOXA1-204ENST00000554607 GSG1L2A8MUP6 293 aa28.95■■■□□ 2.22
FOXA1-204ENST00000554607 MINDY4BA8MYZ0 360 aa28.95■■■□□ 2.22
FOXA1-204ENST00000554607 SNAI1O95863 264 aaPredicted RBP28.95■■■□□ 2.22
FOXA1-204ENST00000554607 NDUFB10O96000 172 aa28.95■■■□□ 2.22
FOXA1-204ENST00000554607 KLHDC9Q8NEP7 349 aa28.95■■■□□ 2.22
FOXA1-204ENST00000554607 LENG1Q96BZ8 264 aaPredicted RBP28.95■■■□□ 2.22
FOXA1-204ENST00000554607 ZHX1Q9UKY1 873 aaPredicted RBP28.95■■■□□ 2.22
FOXA1-204ENST00000554607 RIPK3Q9Y572 518 aa28.95■■■□□ 2.22
FOXA1-204ENST00000554607 DUSP11O75319 330 aaKnown RBP28.94■■■□□ 2.22
FOXA1-204ENST00000554607 FOSL2P15408 326 aa28.94■■■□□ 2.22
FOXA1-204ENST00000554607 EPHB4P54760 987 aa28.94■■■□□ 2.22
FOXA1-204ENST00000554607 FAAP100Q0VG06 881 aa28.94■■■□□ 2.22
FOXA1-204ENST00000554607 CLIP2Q9UDT6 1046 aa28.94■■■□□ 2.22
FOXA1-204ENST00000554607 GREB1LQ9C091 1923 aaPredicted RBP28.93■■■□□ 2.22
FOXA1-204ENST00000554607 KCNA10Q16322 511 aa28.93■■■□□ 2.22
FOXA1-204ENST00000554607 ZNF444Q8N0Y2 327 aaPredicted RBP28.93■■■□□ 2.22
FOXA1-204ENST00000554607 CPXCR1Q8N123 301 aa28.93■■■□□ 2.22
FOXA1-204ENST00000554607 STK11IPQ8N1F8 1099 aa28.93■■■□□ 2.22
FOXA1-204ENST00000554607 SPC25Q9HBM1 224 aa28.93■■■□□ 2.22
FOXA1-204ENST00000554607 FBXO40Q9UH90 709 aa28.93■■■□□ 2.22
FOXA1-204ENST00000554607 MROH7Q68CQ1 1323 aa28.93■■■□□ 2.22
FOXA1-204ENST00000554607 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.92■■■□□ 2.22
FOXA1-204ENST00000554607 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.92■■■□□ 2.22
FOXA1-204ENST00000554607 SLC4A3P48751 1232 aa28.92■■■□□ 2.22
FOXA1-204ENST00000554607 CCSAPQ6IQ19 270 aaPredicted RBP28.92■■■□□ 2.22
FOXA1-204ENST00000554607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.92■■■□□ 2.22
FOXA1-204ENST00000554607 KBTBD3Q8NAB2 608 aa28.92■■■□□ 2.22
FOXA1-204ENST00000554607 PCSK9Q8NBP7 692 aaKnown RBP28.92■■■□□ 2.22
FOXA1-204ENST00000554607 APPBP2Q92624 585 aa28.92■■■□□ 2.22
FOXA1-204ENST00000554607 GLT1D1Q96MS3 346 aa28.92■■■□□ 2.22
FOXA1-204ENST00000554607 FEM1BQ9UK73 627 aa28.92■■■□□ 2.22
FOXA1-204ENST00000554607 SYNPO2Q9UMS6 1093 aa28.92■■■□□ 2.22
FOXA1-204ENST00000554607 ELP1O95163 1332 aa28.92■■■□□ 2.22
FOXA1-204ENST00000554607 SMARCA5O60264 1052 aaPredicted RBP28.91■■■□□ 2.22
FOXA1-204ENST00000554607 TIMP1P01033 207 aa28.91■■■□□ 2.22
FOXA1-204ENST00000554607 GNAT2P19087 354 aa28.91■■■□□ 2.22
FOXA1-204ENST00000554607 CST5P28325 142 aaPredicted RBP28.91■■■□□ 2.22
FOXA1-204ENST00000554607 ACVR2BQ13705 512 aa28.91■■■□□ 2.22
FOXA1-204ENST00000554607 ANKRD35Q8N283 1001 aa28.91■■■□□ 2.22
FOXA1-204ENST00000554607 MKL1Q969V6 931 aa28.91■■■□□ 2.22
FOXA1-204ENST00000554607 GPATCH3Q96I76 525 aa28.91■■■□□ 2.22
FOXA1-204ENST00000554607 ABHD16BQ9H3Z7 469 aa28.91■■■□□ 2.22
FOXA1-204ENST00000554607 IGKV6D-41A0A0C4DH26 115 aa28.9■■■□□ 2.22
FOXA1-204ENST00000554607 ZFYP08048 801 aaPredicted RBP28.9■■■□□ 2.22
FOXA1-204ENST00000554607 OAZ1P54368 228 aa28.9■■■□□ 2.22
FOXA1-204ENST00000554607 CCDC174Q6PII3 467 aa28.9■■■□□ 2.22
FOXA1-204ENST00000554607 CHST13Q8NET6 341 aa28.9■■■□□ 2.22
FOXA1-204ENST00000554607 OSBP2Q969R2 916 aa28.9■■■□□ 2.22
FOXA1-204ENST00000554607 KIFC2Q96AC6 838 aa28.9■■■□□ 2.22
FOXA1-204ENST00000554607 SLC38A10Q9HBR0 1119 aa28.9■■■□□ 2.22
FOXA1-204ENST00000554607 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.9■■■□□ 2.22
FOXA1-204ENST00000554607 RNF113AO15541 343 aaKnown RBP28.89■■■□□ 2.22
FOXA1-204ENST00000554607 RAVER2Q9HCJ3 691 aaKnown RBP28.89■■■□□ 2.22
FOXA1-204ENST00000554607 EYSQ5T1H1 3165 aa28.89■■■□□ 2.21
FOXA1-204ENST00000554607 C6orf222P0C671 652 aaPredicted RBP28.88■■■□□ 2.21
FOXA1-204ENST00000554607 FDX1P10109 184 aa28.88■■■□□ 2.21
FOXA1-204ENST00000554607 TDO2P48775 406 aa28.88■■■□□ 2.21
FOXA1-204ENST00000554607 VTI1AQ96AJ9 217 aa28.88■■■□□ 2.21
FOXA1-204ENST00000554607 GPAA1O43292 621 aa28.87■■■□□ 2.21
FOXA1-204ENST00000554607 TTLL1O95922 423 aa28.87■■■□□ 2.21
FOXA1-204ENST00000554607 APPP05067 770 aa28.87■■■□□ 2.21
FOXA1-204ENST00000554607 LRRFIP1Q32MZ4 808 aaKnown RBP28.87■■■□□ 2.21
FOXA1-204ENST00000554607 MFSD5Q6N075 450 aa28.87■■■□□ 2.21
FOXA1-204ENST00000554607 GMCL1P1Q8NEA9 526 aa28.87■■■□□ 2.21
FOXA1-204ENST00000554607 MTMR4Q9NYA4 1195 aa28.87■■■□□ 2.21
FOXA1-204ENST00000554607 RCAN3Q9UKA8 241 aa28.87■■■□□ 2.21
FOXA1-204ENST00000554607 TBX21Q9UL17 535 aa28.87■■■□□ 2.21
FOXA1-204ENST00000554607 ASGR1P07306 291 aa28.86■■■□□ 2.21
FOXA1-204ENST00000554607 DNAJB2P25686 324 aa28.86■■■□□ 2.21
FOXA1-204ENST00000554607 CDK7P50613 346 aa28.86■■■□□ 2.21
FOXA1-204ENST00000554607 GJA9P57773 515 aa28.86■■■□□ 2.21
FOXA1-204ENST00000554607 PPIGQ13427 754 aaKnown RBP eCLIP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms