RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 SUZ12Q15022 739 aaKnown RBP6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 C2orf27AQ580R0 203 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 UNC5AQ6ZN44 842 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 CHSY3Q70JA7 882 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 NLRC3Q7RTR2 1065 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 FILIP1Q7Z7B0 1213 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 HOMER1Q86YM7 354 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 KLHL23Q8NBE8 558 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 SLC9A7Q96T83 725 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 WDR18Q9BV38 432 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 CNNM2Q9H8M5 875 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 IFT57Q9NWB7 429 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 KLHL3Q9UH77 587 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 ZMYM5Q9UJ78 669 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 PCDHB10Q9UN67 800 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 CDK12Q9NYV4 1490 aaPredicted RBP6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 NPHP4O75161 1426 aaPredicted RBP6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 USP6P35125 1406 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 AATKQ6ZMQ8 1374 aa6.06□□□□□ -1.44
PPP4R3A-204ENST00000554574 KDM2BQ8NHM5 1336 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 KCNA6P17658 529 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 ZC3H12AQ5D1E8 599 aaKnown RBP6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 ARSHQ5FYA8 562 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 TMEM201Q5SNT2 666 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 KIAA0907Q7Z7F0 614 aaPredicted RBP6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 JMYQ8N9B5 988 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 THAP3Q8WTV1 239 aaPredicted RBP6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 KCNK4Q9NYG8 393 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 TACC3Q9Y6A5 838 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 SSH2Q76I76 1423 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 PIK3C2AO00443 1686 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 ERBB4Q15303 1308 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 APAF1O14727 1248 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 PGRP06401 933 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 PDE4BQ07343 736 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 SSRP1Q08945 709 aaKnown RBP6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 TKFCQ3LXA3 575 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 FOXD4L6Q3SYB3 417 aaPredicted RBP6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 CDCP2Q5VXM1 449 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 VHLLQ6RSH7 139 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 FOXD4L3Q6VB84 417 aaPredicted RBP6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 NPAS3Q8IXF0 933 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 CCDC146Q8IYE0 955 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 ST13P5Q8NFI4 369 aaPredicted RBP6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 EDARADDQ8WWZ3 215 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 RUNDC1Q96C34 613 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 HIF3AQ9Y2N7 669 aa6.05□□□□□ -1.44
PPP4R3A-204ENST00000554574 OVOS2A0A0J9YW53 1432 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 OVOS2Q6IE36 1432 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 ACEP12821 1306 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 LRRC7Q96NW7 1537 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 hCG_2014768A0A024R1R8 64 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 CHURC1-FNTBB4DL54 471 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 TNFRSF10CO14798 259 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 AOC2O75106 756 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 DEAF1O75398 565 aaPredicted RBP6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 ADAMTS2O95450 1211 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 RING1Q06587 406 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 COL9A3Q14050 684 aaPredicted RBP6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 INTS3Q68E01 1043 aaKnown RBP6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 ILDR2Q71H61 639 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 DMRTC2Q8IXT2 367 aaPredicted RBP6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 GALNT6Q8NCL4 622 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 ACSF2Q96CM8 615 aaPredicted RBP6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 RCAN3Q9UKA8 241 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 COL4A3BPQ9Y5P4 624 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 SLC12A7Q9Y666 1083 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 PTCH2Q9Y6C5 1203 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 ADGRL3Q9HAR2 1447 aa6.04□□□□□ -1.44
PPP4R3A-204ENST00000554574 SHISA8B8ZZ34 492 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 DNAJC6O75061 913 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 NID1P14543 1247 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 POLR2BP30876 1174 aaKnown RBP6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 IRX6P78412 446 aaPredicted RBP6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 PPM1JQ5JR12 505 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 DUSP27Q5VZP5 1158 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 C16orf86Q6ZW13 317 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 NME9Q86XW9 330 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 TRMT2AQ8IZ69 625 aaKnown RBP6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 KLHL6Q8WZ60 621 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 COG3Q96JB2 828 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 BTBD6Q96KE9 485 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 PRDM6Q9NQX0 595 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 POLKQ9UBT6 870 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 ADAM30Q9UKF2 790 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 RGPD1P0DJD0 1748 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 TTC21BQ7Z4L5 1316 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 TTC21AQ8NDW8 1320 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 STRCP1A6NGW2 1772 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 LTN1O94822 1766 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 U2AF1L5P0DN76 240 aaPredicted RBP6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 GYS2P54840 703 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 ETF1P62495 437 aaKnown RBP6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 IGBP1P78318 339 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 U2AF1Q01081 240 aaKnown RBP eCLIP6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 SLFN5Q08AF3 891 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 EEPD1Q7L9B9 569 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 TCP11L2Q8N4U5 519 aa6.03□□□□□ -1.44
PPP4R3A-204ENST00000554574 UBASH3BQ8TF42 649 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms