RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 INTS3Q68E01 1043 aaKnown RBP7.76□□□□□ -1.17
ATXN3-226ENST00000554350 MCTP1Q6DN14 999 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 DLK2Q6UY11 383 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-226ENST00000554350 FAM20CQ8IXL6 584 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 NIM1KQ8IY84 436 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 TMEM102Q8N9M5 508 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-226ENST00000554350 SETDB2Q96T68 719 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 GPRC5DQ9NZD1 345 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 POLIQ9UNA4 740 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 BCORQ6W2J9 1755 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 ARFGEF2Q9Y6D5 1785 aa7.76□□□□□ -1.17
ATXN3-226ENST00000554350 RAB3GAP2Q9H2M9 1393 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 A0A087WZG4 1122 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 EREGO14944 169 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 SPINK2P20155 84 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 NLRP12P59046 1061 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 C8orf34Q49A92 452 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 C1orf141Q5JVX7 400 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 LCE3BQ5TA77 95 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 PHLDB3Q6NSJ2 640 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 VN1R5Q7Z5H4 357 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 NXPE3Q969Y0 559 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 ZKSCAN3Q9BRR0 538 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 BCL2L13Q9BXK5 485 aa7.75□□□□□ -1.17
ATXN3-226ENST00000554350 PAPPA2Q9BXP8 1791 aa7.74□□□□□ -1.17
ATXN3-226ENST00000554350 SZT2Q5T011 3432 aa7.74□□□□□ -1.17
ATXN3-226ENST00000554350 TONSLQ96HA7 1378 aa7.74□□□□□ -1.17
ATXN3-226ENST00000554350 KIAA0100Q14667 2235 aaKnown RBP7.74□□□□□ -1.17
ATXN3-226ENST00000554350 COBLO75128 1261 aa7.74□□□□□ -1.17
ATXN3-226ENST00000554350 TNFRSF21O75509 655 aa7.74□□□□□ -1.17
ATXN3-226ENST00000554350 GMPSP49915 693 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-226ENST00000554350 PLEKHO1Q53GL0 409 aaPredicted RBP7.74□□□□□ -1.17
ATXN3-226ENST00000554350 NPM2Q86SE8 214 aaKnown RBP7.74□□□□□ -1.17
ATXN3-226ENST00000554350 FAM83CQ9BQN1 747 aa7.74□□□□□ -1.17
ATXN3-226ENST00000554350 DBNDD2Q9BQY9 259 aa7.74□□□□□ -1.17
ATXN3-226ENST00000554350 SOX1O00570 391 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-226ENST00000554350 FYB1O15117 783 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 FKTNO75072 461 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 ANKRD34AQ69YU3 496 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 KRT26Q7Z3Y9 468 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 NBPF5PQ86XG9 351 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-226ENST00000554350 CLEC10AQ8IUN9 316 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 SLC7A3Q8WY07 619 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 PSMD1Q99460 953 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 OSMRQ99650 979 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 RNF208Q9H0X6 261 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 FOXD3Q9UJU5 478 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-226ENST00000554350 TRIM17Q9Y577 477 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 COL4A5P29400 1685 aa7.73□□□□□ -1.17
ATXN3-226ENST00000554350 KIF24Q5T7B8 1368 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 NCAPD2Q15021 1401 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 MKI67P46013 3256 aaKnown RBP7.72□□□□□ -1.17
ATXN3-226ENST00000554350 MEGF11A6BM72 1044 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 TCERG1O14776 1098 aaKnown RBP7.72□□□□□ -1.17
ATXN3-226ENST00000554350 FZD6O60353 706 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 DLGAP3O95886 979 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 BMP3P12645 472 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 PCSK2P16519 638 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 PEAR1Q5VY43 1037 aaPredicted RBP7.72□□□□□ -1.17
ATXN3-226ENST00000554350 DPF3Q92784 378 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 PMEPA1Q969W9 287 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 RUSC1Q9BVN2 902 aa7.72□□□□□ -1.17
ATXN3-226ENST00000554350 OAS3Q9Y6K5 1087 aaKnown RBP7.72□□□□□ -1.17
ATXN3-226ENST00000554350 CARNS1A5YM72 827 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 FAM177BA6PVY3 158 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 ADM5C9JUS6 153 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 PPIP5K2O43314 1243 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 ALDH1B1P30837 517 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 C19orf57Q0VDD7 668 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 SLC39A6Q13433 755 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 BEND4Q6ZU67 534 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 RASAL3Q86YV0 1011 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 CCDC82Q8N4S0 544 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 BSNDQ8WZ55 320 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 TMPRSS13Q9BYE2 586 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 BHLHE41Q9C0J9 482 aaPredicted RBP7.71□□□□□ -1.18
ATXN3-226ENST00000554350 C1orf115Q9H7X2 142 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 LATS2Q9NRM7 1088 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 PGAP2Q9UHJ9 254 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 NPC1L1Q9UHC9 1359 aa7.71□□□□□ -1.18
ATXN3-226ENST00000554350 ANKRD26Q9UPS8 1709 aa7.7□□□□□ -1.18
ATXN3-226ENST00000554350 H7C1D1 291 aa7.7□□□□□ -1.18
ATXN3-226ENST00000554350 AOC3Q16853 763 aa7.7□□□□□ -1.18
ATXN3-226ENST00000554350 SLC4A8Q2Y0W8 1093 aa7.7□□□□□ -1.18
ATXN3-226ENST00000554350 ALKBH2Q6NS38 261 aa7.7□□□□□ -1.18
ATXN3-226ENST00000554350 DTX1Q86Y01 620 aa7.7□□□□□ -1.18
ATXN3-226ENST00000554350 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.7□□□□□ -1.18
ATXN3-226ENST00000554350 SHKBP1Q8TBC3 707 aa7.7□□□□□ -1.18
ATXN3-226ENST00000554350 DCPSQ96C86 337 aaKnown RBP7.7□□□□□ -1.18
ATXN3-226ENST00000554350 COL6A3P12111 3177 aa7.7□□□□□ -1.18
ATXN3-226ENST00000554350 LOC100289279A0A1B0GTE1 492 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 SHTN1A0MZ66 631 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 PHACTR2O75167 634 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 RAD17O75943 681 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 TIAF1O95411 115 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 STARD3NLO95772 234 aa7.69□□□□□ -1.18
ATXN3-226ENST00000554350 TNNT2P45379 298 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-226ENST00000554350 EIF5P55010 431 aaKnown RBP7.69□□□□□ -1.18
ATXN3-226ENST00000554350 GP2P55259 537 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms