RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 HMX1Q9NP08 348 aaPredicted RBP15.41■□□□□ 0.06
SHMT2-211ENST00000554310 CEP290O15078 2479 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 NEDD4P46934 1319 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 RPTORQ8N122 1335 aa15.41■□□□□ 0.06
SHMT2-211ENST00000554310 ATP2A1O14983 1001 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 SGPL1O95470 568 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 FDX1P10109 184 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 TOP1P11387 765 aaKnown RBP15.4■□□□□ 0.06
SHMT2-211ENST00000554310 OAZ1P54368 228 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 TRIM32Q13049 653 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 CCL14Q16627 93 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 FAM160B2Q86V87 743 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 KIFC2Q96AC6 838 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 DEFB118Q96PH6 123 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 SLC5A4Q9NY91 659 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 ISY1Q9ULR0 285 aaKnown RBP15.4■□□□□ 0.06
SHMT2-211ENST00000554310 FRMPD3Q5JV73 1810 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 PLXNA1Q9UIW2 1896 aa15.4■□□□□ 0.06
SHMT2-211ENST00000554310 TMEM232C9JQI7 657 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 PLA2G6O60733 806 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 ZBED4O75132 1171 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 FCER1AP12319 257 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 KCTD2Q14681 263 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 MFSD14CQ5VZR4 134 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 SNRNP48Q6IEG0 339 aaKnown RBP15.39■□□□□ 0.05
SHMT2-211ENST00000554310 DPP9Q86TI2 863 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 DCAF4Q8WV16 495 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 TTC14Q96N46 770 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 CRISPLD2Q9H0B8 497 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 SLC38A10Q9HBR0 1119 aa15.39■□□□□ 0.05
SHMT2-211ENST00000554310 CTDP1Q9Y5B0 961 aaPredicted RBP15.39■□□□□ 0.05
SHMT2-211ENST00000554310 ZNFX1Q9P2E3 1918 aaKnown RBP15.39■□□□□ 0.05
SHMT2-211ENST00000554310 SGSM2O43147 1006 aa15.38■□□□□ 0.05
SHMT2-211ENST00000554310 MCCP23508 829 aa15.38■□□□□ 0.05
SHMT2-211ENST00000554310 CACNB2Q08289 660 aaPredicted RBP15.38■□□□□ 0.05
SHMT2-211ENST00000554310 CCDC178Q5BJE1 867 aa15.38■□□□□ 0.05
SHMT2-211ENST00000554310 OLFML2BQ68BL8 750 aa15.38■□□□□ 0.05
SHMT2-211ENST00000554310 RCSD1Q6JBY9 416 aa15.38■□□□□ 0.05
SHMT2-211ENST00000554310 CHURC1Q8WUH1 139 aa15.38■□□□□ 0.05
SHMT2-211ENST00000554310 TMEM47Q9BQJ4 181 aa15.38■□□□□ 0.05
SHMT2-211ENST00000554310 CNNM2Q9H8M5 875 aa15.38■□□□□ 0.05
SHMT2-211ENST00000554310 KDM4AO75164 1064 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 FARP2O94887 1054 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-211ENST00000554310 IKQ13123 557 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-211ENST00000554310 CCDC96Q2M329 555 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 BMP2KLQ5H9B9 411 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 UBE2Q1Q7Z7E8 422 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 IQCA1Q86XH1 822 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 NPLOC4Q8TAT6 608 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 MMP19Q99542 508 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 KRT23Q9C075 422 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 FLRT1Q9NZU1 646 aa15.37■□□□□ 0.05
SHMT2-211ENST00000554310 MKI67P46013 3256 aaKnown RBP15.37■□□□□ 0.05
SHMT2-211ENST00000554310 IGHA2P01877 340 aa15.36■□□□□ 0.05
SHMT2-211ENST00000554310 PRPF38BQ5VTL8 546 aaKnown RBP15.36■□□□□ 0.05
SHMT2-211ENST00000554310 KCTD1Q719H9 257 aa15.36■□□□□ 0.05
SHMT2-211ENST00000554310 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.36■□□□□ 0.05
SHMT2-211ENST00000554310 RASGRP2Q7LDG7 609 aa15.36■□□□□ 0.05
SHMT2-211ENST00000554310 DGKHQ86XP1 1220 aa15.36■□□□□ 0.05
SHMT2-211ENST00000554310 CPXCR1Q8N123 301 aa15.36■□□□□ 0.05
SHMT2-211ENST00000554310 ANKLE1Q8NAG6 615 aa15.36■□□□□ 0.05
SHMT2-211ENST00000554310 FBXO40Q9UH90 709 aa15.36■□□□□ 0.05
SHMT2-211ENST00000554310 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-211ENST00000554310 B4E1Z4 1266 aa15.35■□□□□ 0.05
SHMT2-211ENST00000554310 COBLO75128 1261 aa15.35■□□□□ 0.05
SHMT2-211ENST00000554310 TFRCP02786 760 aaKnown RBP15.35■□□□□ 0.05
SHMT2-211ENST00000554310 CHST13Q8NET6 341 aa15.35■□□□□ 0.05
SHMT2-211ENST00000554310 MAML3Q96JK9 1138 aa15.35■□□□□ 0.05
SHMT2-211ENST00000554310 RAVER2Q9HCJ3 691 aaKnown RBP15.35■□□□□ 0.05
SHMT2-211ENST00000554310 MTMR7Q9Y216 660 aa15.35■□□□□ 0.05
SHMT2-211ENST00000554310 DIS3Q9Y2L1 958 aaKnown RBP15.35■□□□□ 0.05
SHMT2-211ENST00000554310 MSCO60682 206 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 SNHG28P0DPA3 235 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 PDHBP11177 359 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 CCND3P30281 292 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-211ENST00000554310 CYP2C19P33261 490 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 PTH1RQ03431 593 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 BTNL9Q6UXG8 535 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 ZSCAN10Q96SZ4 725 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-211ENST00000554310 UBAC1Q9BSL1 405 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 OGDHLQ9ULD0 1010 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 PRR12Q9ULL5 1215 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 RIPK3Q9Y572 518 aa15.34■□□□□ 0.05
SHMT2-211ENST00000554310 PGK2P07205 417 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 CYP21A2P08686 494 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 CYBAP13498 195 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 ZNF543Q08ER8 600 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 TRDNQ13061 729 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 ZNF792Q3KQV3 632 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 TKFCQ3LXA3 575 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 ENAHQ8N8S7 591 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-211ENST00000554310 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 CHMP4CQ96CF2 233 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 ZKSCAN3Q9BRR0 538 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 HTATIP2Q9BUP3 242 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 KAT14Q9H8E8 782 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 ZNF536O15090 1300 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 TNKSO95271 1327 aa15.33■□□□□ 0.04
SHMT2-211ENST00000554310 FRMPD2Q68DX3 1309 aaPredicted RBP15.33■□□□□ 0.04
SHMT2-211ENST00000554310 SLC4A3P48751 1232 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms