RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 SNAI1O95863 264 aaPredicted RBP9.29□□□□□ -0.92
ABCD4-220ENST00000553998 POLR3DP05423 398 aaPredicted RBP9.29□□□□□ -0.92
ABCD4-220ENST00000553998 PGK2P07205 417 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 IFIT2P09913 472 aaKnown RBP9.29□□□□□ -0.92
ABCD4-220ENST00000553998 COPB2P35606 906 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 STAT3P40763 770 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 EVX2Q03828 476 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 PLS1Q14651 629 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 KCTD2Q14681 263 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 RAB30Q15771 203 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 KCNA10Q16322 511 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 PSRC1Q6PGN9 363 aaPredicted RBP9.29□□□□□ -0.92
ABCD4-220ENST00000553998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.29□□□□□ -0.92
ABCD4-220ENST00000553998 TMEM199Q8N511 208 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 HERVK_113Q902F9 699 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 C1QTNF1Q9BXJ1 281 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 ANTXR1Q9H6X2 564 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 SH2D4AQ9H788 454 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 IL1RAPL2Q9NP60 686 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
ABCD4-220ENST00000553998 SWAP70Q9UH65 585 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 ZNF214Q9UL59 606 aaPredicted RBP9.29□□□□□ -0.92
ABCD4-220ENST00000553998 FAM184BQ9ULE4 1060 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 CNPY2Q9Y2B0 182 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 MYH8P13535 1937 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 SYNRGQ9UMZ2 1314 aa9.29□□□□□ -0.92
ABCD4-220ENST00000553998 A0A0G2JMZ2 1700 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 DNAJC25-GNG10A0A024R161 153 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 MAGEB6P1A0A0J9YX57 407 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 ARVCFO00192 962 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 APBB1O00213 710 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 VWA5AO00534 786 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 CD4P01730 458 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 CSF2RAP15509 400 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 POU3F3P20264 500 aaPredicted RBP9.28□□□□□ -0.92
ABCD4-220ENST00000553998 ANKRD45Q5TZF3 282 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 ZNF365Q70YC5 407 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 ZNF467Q7Z7K2 595 aaPredicted RBP9.28□□□□□ -0.92
ABCD4-220ENST00000553998 SLC43A3Q8NBI5 491 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 CCDC17Q96LX7 622 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 GLT1D1Q96MS3 346 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 CRNKL1Q9BZJ0 848 aaKnown RBP9.28□□□□□ -0.92
ABCD4-220ENST00000553998 CCDC8Q9H0W5 538 aaPredicted RBP9.28□□□□□ -0.92
ABCD4-220ENST00000553998 UPF3AQ9H1J1 476 aaKnown RBP9.28□□□□□ -0.92
ABCD4-220ENST00000553998 ARHGEF10LQ9HCE6 1279 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 DCP1AQ9NPI6 582 aaPredicted RBP9.28□□□□□ -0.92
ABCD4-220ENST00000553998 MCM9Q9NXL9 1143 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 PPP1R9AQ9ULJ8 1098 aa9.28□□□□□ -0.92
ABCD4-220ENST00000553998 NCOR1O75376 2440 aa9.27□□□□□ -0.92
ABCD4-220ENST00000553998 MYH7P12883 1935 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 MPHOSPH10O00566 681 aaKnown RBP9.27□□□□□ -0.93
ABCD4-220ENST00000553998 ASGR1P07306 291 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 GJA9P57773 515 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 ICA1Q05084 483 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 CCDC129Q6ZRS4 1044 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 FAM126BQ8IXS8 530 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 SPICE1Q8N0Z3 855 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 PCSK9Q8NBP7 692 aaKnown RBP9.27□□□□□ -0.93
ABCD4-220ENST00000553998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.27□□□□□ -0.93
ABCD4-220ENST00000553998 PPM1EQ8WY54 764 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 LENG1Q96BZ8 264 aaPredicted RBP9.27□□□□□ -0.93
ABCD4-220ENST00000553998 IL23AQ9NPF7 189 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 PPP4R2Q9NY27 417 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 MSRAQ9UJ68 235 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 NAV1Q8NEY1 1877 aa9.27□□□□□ -0.93
ABCD4-220ENST00000553998 A0A0U1RQG5 324 aaPredicted RBP9.26□□□□□ -0.93
ABCD4-220ENST00000553998 TCRBV5S4A2TA0A5A2 114 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 MYADML2A6NDP7 307 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 ATP2A1O14983 1001 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 CTAGE5O15320 804 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 SMARCA5O60264 1052 aaPredicted RBP9.26□□□□□ -0.93
ABCD4-220ENST00000553998 FGBP02675 491 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 AKR1B1P15121 316 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 NUCB1Q02818 461 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 TTF1Q15361 905 aaPredicted RBP9.26□□□□□ -0.93
ABCD4-220ENST00000553998 CENPQQ7L2Z9 268 aaPredicted RBP9.26□□□□□ -0.93
ABCD4-220ENST00000553998 CHD1LQ86WJ1 897 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 GPATCH3Q96I76 525 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 CCDC136Q96JN2 1154 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 SEZ6LQ9BYH1 1024 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 SLC28A3Q9HAS3 691 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 FBXO28Q9NVF7 368 aa9.26□□□□□ -0.93
ABCD4-220ENST00000553998 YBX2Q9Y2T7 364 aaKnown RBP9.26□□□□□ -0.93
ABCD4-220ENST00000553998 ERC2O15083 957 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 TLR3O15455 904 aaKnown RBP9.25□□□□□ -0.93
ABCD4-220ENST00000553998 ADCY6O43306 1168 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 ACRP10323 421 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 CYP2D6P10635 497 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 EEF2P13639 858 aaKnown RBP9.25□□□□□ -0.93
ABCD4-220ENST00000553998 PDE6AP16499 860 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 ATP5JP18859 108 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 CDK8P49336 464 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 ACVR2BQ13705 512 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 CCDC85BQ15834 202 aaPredicted RBP9.25□□□□□ -0.93
ABCD4-220ENST00000553998 AAK1Q2M2I8 961 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 SLC9C2Q5TAH2 1124 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 C12orf60Q5U649 245 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 CLEC10AQ8IUN9 316 aa9.25□□□□□ -0.93
ABCD4-220ENST00000553998 SDR42E1Q8WUS8 393 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms