RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 PRCPP42785 496 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 NFIXQ14938 502 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 SLC35G1Q2M3R5 365 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 C4orf32Q8N8J7 132 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 NUP88Q99567 741 aaPredicted RBP16.45■□□□□ 0.22
ACTN1-211ENST00000553882 LAMB1P07942 1786 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 KCNJ18B7U540 433 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 CYTH3O43739 400 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 TM4SF1P30408 202 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 KCNJ12Q14500 433 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 TERF2Q15554 542 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 CNGA4Q8IV77 575 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 MAD2L2Q9UI95 211 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 RWDD2AQ9UIY3 292 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 MYH8P13535 1937 aa16.45■□□□□ 0.22
ACTN1-211ENST00000553882 PDS5AQ29RF7 1337 aaKnown RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 KIAA1551Q9HCM1 1747 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 PES1O00541 588 aaKnown RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 PIP4K2BP78356 416 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 WWC2Q6AWC2 1192 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 NAA15Q9BXJ9 866 aaKnown RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 DISC1Q9NRI5 854 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 MKRN1Q9UHC7 482 aaKnown RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 TFRCP02786 760 aaKnown RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 TPM1P09493 284 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 LONP1P36776 959 aaKnown RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 COPB1P53618 953 aaKnown RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 TCP11X2Q5H9J9 407 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 ZNF569Q5MCW4 686 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 ARL6IP4Q66PJ3 421 aaKnown RBP16.44■□□□□ 0.22
ACTN1-211ENST00000553882 DTHD1Q6ZMT9 781 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 DGKHQ86XP1 1220 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 MAPKAPK5Q8IW41 473 aa16.44■□□□□ 0.22
ACTN1-211ENST00000553882 KIF5CO60282 957 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 ZRANB2O95218 330 aaKnown RBP eCLIP16.43■□□□□ 0.22
ACTN1-211ENST00000553882 NAALADL2Q58DX5 795 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 SPTY2D1Q68D10 685 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-211ENST00000553882 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 PUF60Q9UHX1 559 aaKnown RBP16.43■□□□□ 0.22
ACTN1-211ENST00000553882 CCDC88AQ3V6T2 1871 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 PMS1P54277 932 aaKnown RBP16.43■□□□□ 0.22
ACTN1-211ENST00000553882 ERVK-24P63145 666 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 ZNF444Q8N0Y2 327 aaPredicted RBP16.43■□□□□ 0.22
ACTN1-211ENST00000553882 ARHGEF1Q92888 912 aaKnown RBP16.43■□□□□ 0.22
ACTN1-211ENST00000553882 ABHD10Q9NUJ1 306 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 LIMA1Q9UHB6 759 aaKnown RBP16.43■□□□□ 0.22
ACTN1-211ENST00000553882 PCDHA6Q9UN73 950 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 PCDHA8Q9Y5H6 950 aa16.43■□□□□ 0.22
ACTN1-211ENST00000553882 PLA2G4AP47712 749 aa16.42■□□□□ 0.22
ACTN1-211ENST00000553882 UBXN1Q04323 297 aa16.42■□□□□ 0.22
ACTN1-211ENST00000553882 PYM1Q9BRP8 204 aaKnown RBP16.42■□□□□ 0.22
ACTN1-211ENST00000553882 RTCBQ9Y3I0 505 aaKnown RBP16.42■□□□□ 0.22
ACTN1-211ENST00000553882 KIF20AO95235 890 aa16.42■□□□□ 0.22
ACTN1-211ENST00000553882 UBA7P41226 1012 aa16.42■□□□□ 0.22
ACTN1-211ENST00000553882 GRM4Q14833 912 aa16.42■□□□□ 0.22
ACTN1-211ENST00000553882 ANKRD20A12PQ8NF67 263 aa16.42■□□□□ 0.22
ACTN1-211ENST00000553882 C8orf37Q96NL8 207 aa16.42■□□□□ 0.22
ACTN1-211ENST00000553882 RMND1Q9NWS8 449 aa16.42■□□□□ 0.22
ACTN1-211ENST00000553882 IRS2Q9Y4H2 1338 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 LRRC10BA6NIK2 292 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 KRT9P35527 623 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 RSRC2Q7L4I2 434 aaKnown RBP16.41■□□□□ 0.22
ACTN1-211ENST00000553882 TMEM47Q9BQJ4 181 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 PARD6BQ9BYG5 372 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
ACTN1-211ENST00000553882 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 M0R2N6 131 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 GPR161Q8N6U8 529 aaKnown RBP16.41■□□□□ 0.22
ACTN1-211ENST00000553882 LRRC15Q8TF66 581 aa16.41■□□□□ 0.22
ACTN1-211ENST00000553882 STXBP3O00186 592 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 SASH3O75995 380 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 KCNA4P22459 653 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 KIF4BQ2VIQ3 1234 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 IRF2BP1Q8IU81 584 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 SLC35F6Q8N357 371 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 GOLGA1Q92805 767 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 ZBTB9Q96C00 473 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 SH3GLB2Q9NR46 395 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 BAG3O95817 575 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 PARP1P09874 1014 aaKnown RBP16.4■□□□□ 0.22
ACTN1-211ENST00000553882 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 SPAG1Q07617 926 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 CC2D1AQ6P1N0 951 aaPredicted RBP16.4■□□□□ 0.22
ACTN1-211ENST00000553882 CHP1Q99653 195 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 BARHL2Q9NY43 387 aa16.4■□□□□ 0.22
ACTN1-211ENST00000553882 KLRF2D3W0D1 207 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 LETM2Q2VYF4 491 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 ADSSL1Q8N142 457 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 POLR3GO15318 223 aaPredicted RBP16.39■□□□□ 0.21
ACTN1-211ENST00000553882 TBC1D8O95759 1140 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 RASA1P20936 1047 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 GNAQP50148 359 aa16.39■□□□□ 0.21
ACTN1-211ENST00000553882 USP17L2Q6R6M4 530 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms