RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 PIGSQ96S52 555 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 ALG1Q9BT22 464 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 SMCHD1A6NHR9 2005 aa16.35■□□□□ 0.21
PRKCH-206ENST00000553830 A0A0G2JLL6 359 aaPredicted RBP16.34■□□□□ 0.21
PRKCH-206ENST00000553830 UNCXA6NJT0 531 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 CXCL11O14625 94 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 PRPF3O43395 683 aaKnown RBP16.34■□□□□ 0.21
PRKCH-206ENST00000553830 GUCY1B3Q02153 619 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 SNAPC2Q13487 334 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 TREML2Q5T2D2 321 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 SPRYD7Q5W111 196 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 OTUD7BQ6GQQ9 843 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 RGMBQ6NW40 437 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 PRRT2Q7Z6L0 340 aaPredicted RBP16.34■□□□□ 0.21
PRKCH-206ENST00000553830 RASAL3Q86YV0 1011 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 GPKOWQ92917 476 aaPredicted RBP eCLIP16.34■□□□□ 0.21
PRKCH-206ENST00000553830 C12orf42Q96LP6 360 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 SPZ1Q9BXG8 430 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
PRKCH-206ENST00000553830 SEC63Q9UGP8 760 aaKnown RBP16.34■□□□□ 0.21
PRKCH-206ENST00000553830 FEM1BQ9UK73 627 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 KCNH4Q9UQ05 1017 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 TLL2Q9Y6L7 1015 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 STK36Q9NRP7 1315 aa16.34■□□□□ 0.21
PRKCH-206ENST00000553830 RLFQ13129 1914 aa16.33■□□□□ 0.21
PRKCH-206ENST00000553830 VPS37CA5D8V6 355 aaPredicted RBP16.33■□□□□ 0.2
PRKCH-206ENST00000553830 DEXIO95424 95 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 TAL1P17542 331 aaPredicted RBP16.33■□□□□ 0.2
PRKCH-206ENST00000553830 CDC37Q16543 378 aaPredicted RBP16.33■□□□□ 0.2
PRKCH-206ENST00000553830 SH3D19Q5HYK7 790 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 LARP1BQ659C4 914 aaKnown RBP16.33■□□□□ 0.2
PRKCH-206ENST00000553830 CCDC174Q6PII3 467 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 FAM160B2Q86V87 743 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 CHURC1Q8WUH1 139 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 SLF1Q9BQI6 1058 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 JMJD4Q9H9V9 463 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 CWC22Q9HCG8 908 aaKnown RBP16.33■□□□□ 0.2
PRKCH-206ENST00000553830 GJB4Q9NTQ9 266 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 KIF3AQ9Y496 699 aa16.33■□□□□ 0.2
PRKCH-206ENST00000553830 CCL15-CCL14A0A0B4J2E2 113 aa16.32■□□□□ 0.2
PRKCH-206ENST00000553830 CCL15Q16663 113 aa16.32■□□□□ 0.2
PRKCH-206ENST00000553830 WASF1Q92558 559 aa16.32■□□□□ 0.2
PRKCH-206ENST00000553830 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
PRKCH-206ENST00000553830 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
PRKCH-206ENST00000553830 VPS54Q9P1Q0 977 aa16.32■□□□□ 0.2
PRKCH-206ENST00000553830 CTDP1Q9Y5B0 961 aaPredicted RBP16.32■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L15C9J2P7 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L13C9JLJ4 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L11C9JVI0 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L18D6R9N7 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L22D6RA61 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L17D6RBQ6 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L19D6RCP7 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L20D6RJB6 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 H3BQV1 296 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 SCG2P13521 617 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 GTF2A2P52657 109 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
PRKCH-206ENST00000553830 USP17L24Q0WX57 530 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 PKN1Q16512 942 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 QRICH1Q2TAL8 776 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 IFFO2Q5TF58 517 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 BTNL9Q6UXG8 535 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 FASTKD5Q7L8L6 764 aaKnown RBP16.31■□□□□ 0.2
PRKCH-206ENST00000553830 ATG4CQ96DT6 458 aa16.31■□□□□ 0.2
PRKCH-206ENST00000553830 CETPP11597 493 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 SYT1P21579 422 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 SMARCA1P28370 1054 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 PKP1Q13835 747 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 TRIM29Q14134 588 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 PFKFB3Q16875 520 aaPredicted RBP16.3■□□□□ 0.2
PRKCH-206ENST00000553830 USH1GQ495M9 461 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 CATSPERGQ6ZRH7 1159 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 PROCA1Q8NCQ7 364 aaPredicted RBP16.3■□□□□ 0.2
PRKCH-206ENST00000553830 COA7Q96BR5 231 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 RBM27Q9P2N5 1060 aaKnown RBP16.3■□□□□ 0.2
PRKCH-206ENST00000553830 PPP1R9AQ9ULJ8 1098 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 KCNJ14Q9UNX9 436 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 AGTPBP1Q9UPW5 1226 aa16.3■□□□□ 0.2
PRKCH-206ENST00000553830 PNMA6FA0A0J9YX94 578 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 ZBTB5O15062 677 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 STX6O43752 255 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 SLC10A3P09131 477 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 ZBTB48P10074 688 aaPredicted RBP16.29■□□□□ 0.2
PRKCH-206ENST00000553830 PDCP20941 246 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 APLP1P51693 650 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 NAPAP54920 295 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 MOGSQ13724 837 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 MCTP1Q6DN14 999 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 CYP4F22Q6NT55 531 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 CPXCR1Q8N123 301 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 BRI3BPQ8WY22 251 aa16.29■□□□□ 0.2
PRKCH-206ENST00000553830 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
PRKCH-206ENST00000553830 PPP1R11O60927 126 aaPredicted RBP16.28■□□□□ 0.2
PRKCH-206ENST00000553830 DSG3P32926 999 aa16.28■□□□□ 0.2
PRKCH-206ENST00000553830 KRT40Q6A162 431 aa16.28■□□□□ 0.2
PRKCH-206ENST00000553830 GPAT2Q6NUI2 795 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms