RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 TSPY2A6NKD2 308 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 TPM1P09493 284 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 GRIK5Q16478 980 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 LONRF2Q1L5Z9 754 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 FILIP1LQ4L180 1135 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 ZNF658Q5TYW1 1059 aaPredicted RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 PTF1AQ7RTS3 328 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 SLF1Q9BQI6 1058 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 CRNKL1Q9BZJ0 848 aaKnown RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 SRP68Q9UHB9 627 aaKnown RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 CDC23Q9UJX2 597 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 MTMR7Q9Y216 660 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 ZNF652Q9Y2D9 606 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 DDX60LQ5H9U9 1706 aaKnown RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 USP17L3A6NCW0 530 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 USP17L4A6NCW7 530 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 M0R2N6 131 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 NKRFO15226 690 aaKnown RBP eCLIP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 CYTH3O43739 400 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 PCP11498 1178 aaKnown RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 STAT6P42226 847 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 SMC1AQ14683 1233 aaKnown RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 WWC2Q6AWC2 1192 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 USP17L1Q7RTZ2 530 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 BLIDQ8IZY5 108 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 SLC44A5Q8NCS7 719 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 NUP88Q99567 741 aaPredicted RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 CPVLQ9H3G5 476 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 ARFGAP3Q9NP61 516 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 DISC1Q9NRI5 854 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 MCM9Q9NXL9 1143 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 ARPP21Q9UBL0 812 aaPredicted RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 ZNF831Q5JPB2 1677 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 LRRC10BA6NIK2 292 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 KLRC4O43908 158 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 KRT9P35527 623 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 TRAPPC10P48553 1259 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 TFAP4Q01664 338 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 KIF4BQ2VIQ3 1234 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 AMIGO3Q86WK7 504 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 NOA1Q8NC60 698 aaKnown RBP7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 PNMA1Q8ND90 353 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 CCDC51Q96ER9 411 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 EEF2KMTQ96G04 330 aa7.82□□□□□ -1.16
LINC-ROR-201ENST00000553704 IRS2Q9Y4H2 1338 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 TTC26A0AVF1 554 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 PARP1P09874 1014 aaKnown RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 RHOXF2BP0C7M4 288 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 HIBADHP31937 336 aaKnown RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 UBXN1Q04323 297 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 INF2Q27J81 1249 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 NCAPH2Q6IBW4 605 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 ADSSL1Q8N142 457 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 RHOXF2Q9BQY4 288 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 ATP8A2Q9NTI2 1148 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 MAD2L2Q9UI95 211 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 PCDHA6Q9UN73 950 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 PCDHA4Q9UN74 947 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 TTF2Q9UNY4 1162 aaKnown RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 PCDHA8Q9Y5H6 950 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 FLT1P17948 1338 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 CTAGE9A4FU28 777 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 CCDC151A5D8V7 595 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 ATP8B1O43520 1251 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 LONP1P36776 959 aaKnown RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 KLK7P49862 253 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 VSNL1P62760 191 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 AMPD2Q01433 879 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 DIXDC1Q155Q3 683 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 SBK1Q52WX2 424 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 BEND6Q5SZJ8 279 aaPredicted RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 CLEC4GQ6UXB4 293 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 CYP26C1Q6V0L0 522 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 TMTC1Q8IUR5 882 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 MSANTD4Q8NCY6 345 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 SH3RF3Q8TEJ3 882 aaPredicted RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 GPR101Q96P66 508 aaPredicted RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 NAPGQ99747 312 aaPredicted RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 KAT14Q9H8E8 782 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 MKRN1Q9UHC7 482 aaKnown RBP7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 SNED1Q8TER0 1413 aa7.81□□□□□ -1.16
LINC-ROR-201ENST00000553704 PDS5AQ29RF7 1337 aaKnown RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 MAP2K7O14733 419 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 GOLGA8HP0CJ92 632 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 GTF2E1P29083 439 aaPredicted RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 RPS8P62241 208 aaKnown RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 HERVK_113P62684 666 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 GRM4Q14833 912 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 ARL6IP4Q66PJ3 421 aaKnown RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 WDR59Q6PJI9 974 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 HEATR3Q7Z4Q2 680 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 DHX37Q8IY37 1157 aaKnown RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 RNF216Q9NWF9 866 aaPredicted RBP7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 HDAC6Q9UBN7 1215 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 RAB21Q9UL25 225 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 ROBO3Q96MS0 1386 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 SPATA31A5Q5VU36 1347 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 SPATA31A7Q8IWB4 1347 aa7.8□□□□□ -1.16
LINC-ROR-201ENST00000553704 RASSF10A6NK89 507 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms