RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 SENP2Q9HC62 589 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 ZSWIM6Q9HCJ5 1215 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 TXNRD2Q9NNW7 524 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 NAP1L2Q9ULW6 460 aaPredicted RBP16.16■□□□□ 0.18
TUBB3-202ENST00000553656 PCNTO95613 3336 aa16.16■□□□□ 0.18
TUBB3-202ENST00000553656 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
TUBB3-202ENST00000553656 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-202ENST00000553656 FMNL1O95466 1100 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-202ENST00000553656 GOLGA8HP0CJ92 632 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 KIF5BP33176 963 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 SLC16A2P36021 539 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 COL9A3Q14050 684 aaPredicted RBP16.15■□□□□ 0.18
TUBB3-202ENST00000553656 SYDE2Q5VT97 1194 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 TTBK2Q6IQ55 1244 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 Q6ZUG5 572 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 SGMS1Q86VZ5 419 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
TUBB3-202ENST00000553656 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 PRR12Q9ULL5 1215 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 ADAMTS5Q9UNA0 930 aa16.15■□□□□ 0.18
TUBB3-202ENST00000553656 A0A0G2JMZ2 1700 aa16.14■□□□□ 0.17
TUBB3-202ENST00000553656 TNPO2O14787 897 aaKnown RBP16.14■□□□□ 0.17
TUBB3-202ENST00000553656 PSMC4P43686 418 aa16.14■□□□□ 0.17
TUBB3-202ENST00000553656 TROAPQ12815 778 aa16.14■□□□□ 0.17
TUBB3-202ENST00000553656 GRM4Q14833 912 aa16.14■□□□□ 0.17
TUBB3-202ENST00000553656 WDR78Q5VTH9 848 aa16.14■□□□□ 0.17
TUBB3-202ENST00000553656 SPATC1LQ9H0A9 340 aa16.14■□□□□ 0.17
TUBB3-202ENST00000553656 EFCC1Q9HA90 598 aa16.14■□□□□ 0.17
TUBB3-202ENST00000553656 PARP14Q460N5 1801 aa16.14■□□□□ 0.17
TUBB3-202ENST00000553656 KLF18A0A0U1RQI7 1052 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 ZBTB43O43298 467 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 PEX10O60683 326 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 CNMDO75829 334 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 GNRH1P01148 92 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 HOXD10P28358 340 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 MAPK4P31152 587 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 COPB2P35606 906 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 GNAQP50148 359 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 TMEM132BQ14DG7 1078 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 BTNL9Q6UXG8 535 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 CTU1Q7Z7A3 348 aaKnown RBP16.13■□□□□ 0.17
TUBB3-202ENST00000553656 MICU3Q86XE3 530 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 CPXCR1Q8N123 301 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 BRF1Q92994 677 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 COA7Q96BR5 231 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 MAP3K14Q99558 947 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 MYL10Q9BUA6 226 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 TEX13BQ9BXU2 312 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 SLC38A10Q9HBR0 1119 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 PDRG1Q9NUG6 133 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 RLFQ13129 1914 aa16.13■□□□□ 0.17
TUBB3-202ENST00000553656 KLRF2D3W0D1 207 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 SLC25A27O95847 323 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 STAT3P40763 770 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 OAZ1P54368 228 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 Q3C1V9 767 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 APOA5Q6Q788 366 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 POTEEQ6S8J3 1075 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 NCAPG2Q86XI2 1143 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 FBXL16Q8N461 479 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 MOV10L1Q9BXT6 1211 aaKnown RBP16.12■□□□□ 0.17
TUBB3-202ENST00000553656 ARHGAP39Q9C0H5 1083 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 UBA5Q9GZZ9 404 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 PNMA2Q9UL42 364 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 IVNS1ABPQ9Y6Y0 642 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 CASP8AP2Q9UKL3 1982 aa16.12■□□□□ 0.17
TUBB3-202ENST00000553656 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
TUBB3-202ENST00000553656 GOLGA8BA8MQT2 603 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 RXRAP19793 462 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
TUBB3-202ENST00000553656 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 CCDC144CPQ8IYA2 1237 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 STAG2Q8N3U4 1231 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 SHCBP1Q8NEM2 672 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 REPS2Q8NFH8 660 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 IL17RAQ96F46 866 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 TRIM47Q96LD4 638 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 LZTS2Q9BRK4 669 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 BACH2Q9BYV9 841 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 PORCNQ9H237 461 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 RANBP17Q9H2T7 1088 aaKnown RBP16.11■□□□□ 0.17
TUBB3-202ENST00000553656 MROH8Q9H579 483 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
TUBB3-202ENST00000553656 MAD2L2Q9UI95 211 aa16.11■□□□□ 0.17
TUBB3-202ENST00000553656 ZNF214Q9UL59 606 aaPredicted RBP16.11■□□□□ 0.17
TUBB3-202ENST00000553656 GOLGA8AA7E2F4 631 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 ATP2A1O14983 1001 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 ERCC3P19447 782 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 RBM25P49756 843 aaKnown RBP16.1■□□□□ 0.17
TUBB3-202ENST00000553656 RCAN1P53805 252 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 PRMT2P55345 433 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 SNAP25P60880 206 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 ANKRD1Q15327 319 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 RTN1Q16799 776 aa16.1■□□□□ 0.17
TUBB3-202ENST00000553656 OTOP1Q7RTM1 612 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms