RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 FPGT-TNNI3KV9GXZ4 949 aa6.08□□□□□ -1.44
VTI1B-202ENST00000553619 HIP1O00291 1037 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 H2AFB1P0C5Y9 115 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 H2AFB2P0C5Z0 115 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 UQCRFS1P1P0C7P4 283 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 TARSP26639 723 aaKnown RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 WEE1P30291 646 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 TIMM10P62072 90 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 NRG1Q02297 640 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 DDR1Q08345 913 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 PUM3Q15397 648 aaKnown RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 GRIK5Q16478 980 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 ATP2B3Q16720 1220 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 CRY2Q49AN0 593 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 CAVIN4Q5BKX8 364 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 PERM1Q5SV97 790 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 TTC22Q5TAA0 569 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 STYK1Q6J9G0 422 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 DHX32Q7L7V1 743 aaKnown RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 SP8Q8IXZ3 490 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 CNTROBQ8N137 903 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 EAF2Q96CJ1 260 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 IFT43Q96FT9 208 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 PUS3Q9BZE2 481 aaKnown RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 CCDC8Q9H0W5 538 aaPredicted RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 GNL3LQ9NVN8 582 aaKnown RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 MINPP1Q9UNW1 487 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 LAMB2P55268 1798 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 COL24A1Q17RW2 1714 aa6.07□□□□□ -1.44
VTI1B-202ENST00000553619 DDX60Q8IY21 1712 aaKnown RBP6.07□□□□□ -1.44
VTI1B-202ENST00000553619 TUBGCP6Q96RT7 1819 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 A0A1B0GUL7 405 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 SASH3O75995 380 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 MICAL2O94851 1124 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 ATP5JP18859 108 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 ATP2B4P23634 1241 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 KCNJ4P48050 445 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 TGFB2P61812 414 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 CHRNDQ07001 517 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 C11orf91Q3C1V1 193 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 TTC39AQ5SRH9 613 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 MSL1Q68DK7 614 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 TRPM4Q8TD43 1214 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 RUFY2Q8WXA3 655 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 CELF1Q92879 486 aaKnown RBP6.06□□□□□ -1.44
VTI1B-202ENST00000553619 ZNF622Q969S3 477 aaKnown RBP eCLIP6.06□□□□□ -1.44
VTI1B-202ENST00000553619 RILPL2Q969X0 211 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 EVI5LQ96CN4 794 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 ZNF512BQ96KM6 892 aaPredicted RBP6.06□□□□□ -1.44
VTI1B-202ENST00000553619 PSMG3-AS1Q96PY0 264 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 SSBP4Q9BWG4 385 aaPredicted RBP6.06□□□□□ -1.44
VTI1B-202ENST00000553619 UPF2Q9HAU5 1272 aaKnown RBP6.06□□□□□ -1.44
VTI1B-202ENST00000553619 USP20Q9Y2K6 914 aa6.06□□□□□ -1.44
VTI1B-202ENST00000553619 SALL3Q9BXA9 1300 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 IGSF3O75054 1194 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 CDC45O75419 566 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 SRGNP10124 158 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 RARAP10276 462 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 GPLD1P80108 840 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 R3HDM1Q15032 1099 aaKnown RBP6.05□□□□□ -1.44
VTI1B-202ENST00000553619 TTF1Q15361 905 aaPredicted RBP6.05□□□□□ -1.44
VTI1B-202ENST00000553619 ARTNQ5T4W7 220 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 ZSCAN25Q6NSZ9 544 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 VPS37DQ86XT2 251 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 C2CD5Q86YS7 1000 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 TP53INP1Q96A56 240 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 MYO19Q96H55 970 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 EYA3Q99504 573 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 FRRS1LQ9P0K9 344 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 LRFN2Q9ULH4 789 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 NRXN2Q9P2S2 1712 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 ABCC12Q96J65 1359 aa6.05□□□□□ -1.44
VTI1B-202ENST00000553619 XDHP47989 1333 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 PRMT3O60678 531 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 FRAT2O75474 233 aaPredicted RBP6.04□□□□□ -1.44
VTI1B-202ENST00000553619 TAF5LO75529 589 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 SDSP20132 328 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 FGFR2P21802 821 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 SOGA3Q5TF21 947 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 ELMSAN1Q6PJG2 1045 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 C15orf52Q6ZUT6 534 aaKnown RBP6.04□□□□□ -1.44
VTI1B-202ENST00000553619 HFE2Q6ZVN8 426 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 FBXO11Q86XK2 927 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 VGLL2Q8N8G2 317 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 SUPT20HQ8NEM7 779 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 PI4K2BQ8TCG2 481 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 DBNDD2Q9BQY9 259 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 BACH2Q9BYV9 841 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 BOLA2Q9H3K6 86 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 SPON1Q9HCB6 807 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 ZFP64Q9NPA5 681 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 FAM13BQ9NYF5 915 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 PODXL2Q9NZ53 605 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 ATP6V0A2Q9Y487 856 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 CD2APQ9Y5K6 639 aa6.04□□□□□ -1.44
VTI1B-202ENST00000553619 ZNF804BA4D1E1 1349 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 OPLAHO14841 1288 aa6.03□□□□□ -1.44
VTI1B-202ENST00000553619 EPB41L2O43491 1005 aaKnown RBP6.03□□□□□ -1.44
VTI1B-202ENST00000553619 REC8O95072 547 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms