RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ZNF214Q9UL59 606 aaPredicted RBP26.74■■□□□ 1.87
TDP1-206ENST00000553569 IVNS1ABPQ9Y6Y0 642 aa26.74■■□□□ 1.87
TDP1-206ENST00000553569 PRC1O43663 620 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 SLC16A2P36021 539 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 STAT3P40763 770 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 SLC4A3P48751 1232 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 ZNF543Q08ER8 600 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 COL9A3Q14050 684 aaPredicted RBP26.73■■□□□ 1.87
TDP1-206ENST00000553569 WTAPQ15007 396 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 TMEM67Q5HYA8 995 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 RASEFQ8IZ41 740 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 SHCBP1Q8NEM2 672 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 SOCS4Q8WXH5 440 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 NUDT12Q9BQG2 462 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 SLC38A10Q9HBR0 1119 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 RAVER2Q9HCJ3 691 aaKnown RBP26.73■■□□□ 1.87
TDP1-206ENST00000553569 GJD2Q9UKL4 321 aa26.73■■□□□ 1.87
TDP1-206ENST00000553569 PLA2G6O60733 806 aa26.72■■□□□ 1.87
TDP1-206ENST00000553569 SNHG28P0DPA3 235 aa26.72■■□□□ 1.87
TDP1-206ENST00000553569 ZKSCAN1P17029 563 aaPredicted RBP26.72■■□□□ 1.87
TDP1-206ENST00000553569 SNAP25P60880 206 aa26.72■■□□□ 1.87
TDP1-206ENST00000553569 SNRNP48Q6IEG0 339 aaKnown RBP26.72■■□□□ 1.87
TDP1-206ENST00000553569 RIOX2Q8IUF8 465 aa26.72■■□□□ 1.87
TDP1-206ENST00000553569 SENP2Q9HC62 589 aa26.72■■□□□ 1.87
TDP1-206ENST00000553569 PRR12Q9ULL5 1215 aa26.72■■□□□ 1.87
TDP1-206ENST00000553569 ADCY3O60266 1144 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 GOLGA8HP0CJ92 632 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 ELNP15502 786 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 CYP2B6P20813 491 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 GRK4P32298 578 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 MCM5P33992 734 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 IRF5Q13568 498 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 SYDE2Q5VT97 1194 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 TEX13BQ9BXU2 312 aa26.71■■□□□ 1.87
TDP1-206ENST00000553569 HTTP42858 3142 aa26.7■■□□□ 1.87
TDP1-206ENST00000553569 SLC25A27O95847 323 aa26.7■■□□□ 1.86
TDP1-206ENST00000553569 MYCP01106 439 aaPredicted RBP26.7■■□□□ 1.86
TDP1-206ENST00000553569 PTPREP23469 700 aa26.7■■□□□ 1.86
TDP1-206ENST00000553569 MORN1Q5T089 497 aa26.7■■□□□ 1.86
TDP1-206ENST00000553569 CCDC174Q6PII3 467 aa26.7■■□□□ 1.86
TDP1-206ENST00000553569 SLAIN1Q8ND83 568 aa26.7■■□□□ 1.86
TDP1-206ENST00000553569 ARMC5Q96C12 935 aa26.7■■□□□ 1.86
TDP1-206ENST00000553569 MROH8Q9H579 483 aa26.7■■□□□ 1.86
TDP1-206ENST00000553569 BIN2Q9UBW5 565 aaPredicted RBP26.7■■□□□ 1.86
TDP1-206ENST00000553569 SLC15A5A6NIM6 579 aa26.69■■□□□ 1.86
TDP1-206ENST00000553569 HSPA4P34932 840 aa26.69■■□□□ 1.86
TDP1-206ENST00000553569 ADCK5Q3MIX3 580 aa26.69■■□□□ 1.86
TDP1-206ENST00000553569 GPATCH4Q5T3I0 446 aaKnown RBP26.69■■□□□ 1.86
TDP1-206ENST00000553569 BTNL9Q6UXG8 535 aa26.69■■□□□ 1.86
TDP1-206ENST00000553569 NBPF11Q86T75 865 aa26.69■■□□□ 1.86
TDP1-206ENST00000553569 IGDCC4Q8TDY8 1250 aa26.69■■□□□ 1.86
TDP1-206ENST00000553569 NEK1Q96PY6 1258 aa26.69■■□□□ 1.86
TDP1-206ENST00000553569 GPHNQ9NQX3 736 aaPredicted RBP26.69■■□□□ 1.86
TDP1-206ENST00000553569 ZNF236Q9UL36 1845 aa26.69■■□□□ 1.86
TDP1-206ENST00000553569 PARP1P09874 1014 aaKnown RBP26.68■■□□□ 1.86
TDP1-206ENST00000553569 FDX1P10109 184 aa26.68■■□□□ 1.86
TDP1-206ENST00000553569 COPB2P35606 906 aa26.68■■□□□ 1.86
TDP1-206ENST00000553569 RGS2P41220 211 aa26.68■■□□□ 1.86
TDP1-206ENST00000553569 GRB14Q14449 540 aa26.68■■□□□ 1.86
TDP1-206ENST00000553569 KRT32Q14532 448 aa26.68■■□□□ 1.86
TDP1-206ENST00000553569 LRRC2Q9BYS8 371 aa26.68■■□□□ 1.86
TDP1-206ENST00000553569 CPVLQ9H3G5 476 aa26.68■■□□□ 1.86
TDP1-206ENST00000553569 ATP2A1O14983 1001 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 OAZ1P54368 228 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 MAP2K5Q13163 448 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 TSGA10IPQ3SY00 556 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 ASPRV1Q53RT3 343 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 USP6NLQ92738 828 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 ZNF333Q96JL9 665 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 APBA2Q99767 749 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 LY9Q9HBG7 655 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 RIPK3Q9Y572 518 aa26.67■■□□□ 1.86
TDP1-206ENST00000553569 SH2B2O14492 632 aaPredicted RBP26.66■■□□□ 1.86
TDP1-206ENST00000553569 ADORA2AP29274 412 aa26.66■■□□□ 1.86
TDP1-206ENST00000553569 KCNB2Q92953 911 aa26.66■■□□□ 1.86
TDP1-206ENST00000553569 TMEM87BQ96K49 555 aa26.66■■□□□ 1.86
TDP1-206ENST00000553569 AGBL1Q96MI9 1066 aa26.66■■□□□ 1.86
TDP1-206ENST00000553569 MMP19Q99542 508 aa26.66■■□□□ 1.86
TDP1-206ENST00000553569 UBA5Q9GZZ9 404 aa26.66■■□□□ 1.86
TDP1-206ENST00000553569 HOMER2Q9NSB8 354 aa26.66■■□□□ 1.86
TDP1-206ENST00000553569 SNX14Q9Y5W7 946 aa26.66■■□□□ 1.86
TDP1-206ENST00000553569 ZNF536O15090 1300 aa26.65■■□□□ 1.86
TDP1-206ENST00000553569 FCER1AP12319 257 aa26.65■■□□□ 1.86
TDP1-206ENST00000553569 NFXL1Q6ZNB6 911 aa26.65■■□□□ 1.86
TDP1-206ENST00000553569 CATIPQ7Z7H3 387 aa26.65■■□□□ 1.86
TDP1-206ENST00000553569 PXYLP1Q8TE99 480 aa26.65■■□□□ 1.86
TDP1-206ENST00000553569 TCEANC2Q96MN5 208 aa26.65■■□□□ 1.86
TDP1-206ENST00000553569 JAKMIP1Q96N16 626 aaKnown RBP26.65■■□□□ 1.86
TDP1-206ENST00000553569 MTA3Q9BTC8 594 aa26.65■■□□□ 1.86
TDP1-206ENST00000553569 USP26Q9BXU7 913 aa26.65■■□□□ 1.86
TDP1-206ENST00000553569 RANBP17Q9H2T7 1088 aaKnown RBP26.65■■□□□ 1.86
TDP1-206ENST00000553569 ZNFX1Q9P2E3 1918 aaKnown RBP26.65■■□□□ 1.86
TDP1-206ENST00000553569 STRNO43815 780 aa26.64■■□□□ 1.86
TDP1-206ENST00000553569 INHAP05111 366 aa26.64■■□□□ 1.86
TDP1-206ENST00000553569 TAL1P17542 331 aaPredicted RBP26.64■■□□□ 1.86
TDP1-206ENST00000553569 SOX10P56693 466 aa26.64■■□□□ 1.86
TDP1-206ENST00000553569 STAG2Q8N3U4 1231 aa26.64■■□□□ 1.86
TDP1-206ENST00000553569 TRIB2Q92519 343 aa26.64■■□□□ 1.86
TDP1-206ENST00000553569 EPB41L2O43491 1005 aaKnown RBP26.63■■□□□ 1.85
TDP1-206ENST00000553569 XRCC5P13010 732 aaKnown RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms