RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CREB3L3Q68CJ9 461 aa21.67■■□□□ 1.06
CPSF2-202ENST00000553427 SAMD1Q6SPF0 538 aaPredicted RBP21.67■■□□□ 1.06
CPSF2-202ENST00000553427 BTNL9Q6UXG8 535 aa21.67■■□□□ 1.06
CPSF2-202ENST00000553427 CYB5R4Q7L1T6 521 aa21.67■■□□□ 1.06
CPSF2-202ENST00000553427 ABRAQ8N0Z2 381 aa21.67■■□□□ 1.06
CPSF2-202ENST00000553427 KIFC2Q96AC6 838 aa21.67■■□□□ 1.06
CPSF2-202ENST00000553427 CWC22Q9HCG8 908 aaKnown RBP21.67■■□□□ 1.06
CPSF2-202ENST00000553427 IVNS1ABPQ9Y6Y0 642 aa21.67■■□□□ 1.06
CPSF2-202ENST00000553427 COL11A1P12107 1806 aaPredicted RBP21.66■■□□□ 1.06
CPSF2-202ENST00000553427 ZBED4O75132 1171 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 HOXC6P09630 235 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 STAT3P40763 770 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 RGS2P41220 211 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 MAP2K5Q13163 448 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 PLS1Q14651 629 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 RNF20Q5VTR2 975 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 KCTD1Q719H9 257 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 RASGRP2Q7LDG7 609 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 MB21D2Q8IYB1 491 aaPredicted RBP21.66■■□□□ 1.06
CPSF2-202ENST00000553427 TRMT44Q8IYL2 757 aaKnown RBP21.66■■□□□ 1.06
CPSF2-202ENST00000553427 PNMA1Q8ND90 353 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 SH3TC2Q8TF17 1288 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 APBA2Q99767 749 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 MTA3Q9BTC8 594 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 KAT14Q9H8E8 782 aa21.66■■□□□ 1.06
CPSF2-202ENST00000553427 ZNF543Q08ER8 600 aa21.65■■□□□ 1.06
CPSF2-202ENST00000553427 CCDC96Q2M329 555 aa21.65■■□□□ 1.06
CPSF2-202ENST00000553427 GPATCH4Q5T3I0 446 aaKnown RBP21.65■■□□□ 1.06
CPSF2-202ENST00000553427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.65■■□□□ 1.06
CPSF2-202ENST00000553427 EPB41L2O43491 1005 aaKnown RBP21.64■■□□□ 1.05
CPSF2-202ENST00000553427 CAPN15O75808 1086 aa21.64■■□□□ 1.05
CPSF2-202ENST00000553427 SART3Q15020 963 aaKnown RBP21.64■■□□□ 1.05
CPSF2-202ENST00000553427 TSGA10IPQ3SY00 556 aa21.64■■□□□ 1.05
CPSF2-202ENST00000553427 IFIT1BQ5T764 474 aaKnown RBP21.64■■□□□ 1.05
CPSF2-202ENST00000553427 WDR78Q5VTH9 848 aa21.64■■□□□ 1.05
CPSF2-202ENST00000553427 NCAPG2Q86XI2 1143 aa21.64■■□□□ 1.05
CPSF2-202ENST00000553427 PRR12Q9ULL5 1215 aa21.64■■□□□ 1.05
CPSF2-202ENST00000553427 ISY1Q9ULR0 285 aaKnown RBP21.64■■□□□ 1.05
CPSF2-202ENST00000553427 RBBP6Q7Z6E9 1792 aaKnown RBP21.64■■□□□ 1.05
CPSF2-202ENST00000553427 REC8O95072 547 aa21.63■■□□□ 1.05
CPSF2-202ENST00000553427 HMGCRP04035 888 aa21.63■■□□□ 1.05
CPSF2-202ENST00000553427 ELNP15502 786 aa21.63■■□□□ 1.05
CPSF2-202ENST00000553427 UBXN2AP68543 259 aa21.63■■□□□ 1.05
CPSF2-202ENST00000553427 IKQ13123 557 aaPredicted RBP21.63■■□□□ 1.05
CPSF2-202ENST00000553427 SNRNP48Q6IEG0 339 aaKnown RBP21.63■■□□□ 1.05
CPSF2-202ENST00000553427 MTMR7Q9Y216 660 aa21.63■■□□□ 1.05
CPSF2-202ENST00000553427 CTDP1Q9Y5B0 961 aaPredicted RBP21.63■■□□□ 1.05
CPSF2-202ENST00000553427 INHAP05111 366 aa21.62■■□□□ 1.05
CPSF2-202ENST00000553427 CYP2B6P20813 491 aa21.62■■□□□ 1.05
CPSF2-202ENST00000553427 ANTXR2P58335 489 aa21.62■■□□□ 1.05
CPSF2-202ENST00000553427 ASPRV1Q53RT3 343 aa21.62■■□□□ 1.05
CPSF2-202ENST00000553427 SYDE2Q5VT97 1194 aa21.62■■□□□ 1.05
CPSF2-202ENST00000553427 RANBP17Q9H2T7 1088 aaKnown RBP21.62■■□□□ 1.05
CPSF2-202ENST00000553427 ERICH2A1L162 156 aa21.61■■□□□ 1.05
CPSF2-202ENST00000553427 IFIT3O14879 490 aaKnown RBP21.61■■□□□ 1.05
CPSF2-202ENST00000553427 FCER1AP12319 257 aa21.61■■□□□ 1.05
CPSF2-202ENST00000553427 ADORA2AP29274 412 aa21.61■■□□□ 1.05
CPSF2-202ENST00000553427 TTBK2Q6IQ55 1244 aa21.61■■□□□ 1.05
CPSF2-202ENST00000553427 TRIB2Q92519 343 aa21.61■■□□□ 1.05
CPSF2-202ENST00000553427 KCNB2Q92953 911 aa21.61■■□□□ 1.05
CPSF2-202ENST00000553427 ZNF536O15090 1300 aa21.6■■□□□ 1.05
CPSF2-202ENST00000553427 FRMPD2Q68DX3 1309 aaPredicted RBP21.6■■□□□ 1.05
CPSF2-202ENST00000553427 ZKSCAN1P17029 563 aaPredicted RBP21.6■■□□□ 1.05
CPSF2-202ENST00000553427 MCM5P33992 734 aa21.6■■□□□ 1.05
CPSF2-202ENST00000553427 RGS19P49795 217 aa21.6■■□□□ 1.05
CPSF2-202ENST00000553427 TKFCQ3LXA3 575 aa21.6■■□□□ 1.05
CPSF2-202ENST00000553427 CHST13Q8NET6 341 aa21.6■■□□□ 1.05
CPSF2-202ENST00000553427 RAVER2Q9HCJ3 691 aaKnown RBP21.6■■□□□ 1.05
CPSF2-202ENST00000553427 GPCPD1Q9NPB8 672 aa21.6■■□□□ 1.05
CPSF2-202ENST00000553427 BIN2Q9UBW5 565 aaPredicted RBP21.6■■□□□ 1.05
CPSF2-202ENST00000553427 FBXO40Q9UH90 709 aa21.6■■□□□ 1.05
CPSF2-202ENST00000553427 PNMA2Q9UL42 364 aa21.6■■□□□ 1.05
CPSF2-202ENST00000553427 WDR19Q8NEZ3 1342 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 IGHA2P01877 340 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 SOX10P56693 466 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 KRT32Q14532 448 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 WTAPQ15007 396 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 TMEM67Q5HYA8 995 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 MAP3K21Q5TCX8 1036 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 CPXCR1Q8N123 301 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 IGDCC4Q8TDY8 1250 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 CHMP4CQ96CF2 233 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 TMEM87BQ96K49 555 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 MMP19Q99542 508 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 TMEM106CQ9BVX2 250 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 SLC5A4Q9NY91 659 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 RIPK3Q9Y572 518 aa21.59■■□□□ 1.05
CPSF2-202ENST00000553427 KIAA0100Q14667 2235 aaKnown RBP21.59■■□□□ 1.05
CPSF2-202ENST00000553427 BRCA2P51587 3418 aa21.58■■□□□ 1.05
CPSF2-202ENST00000553427 PRC1O43663 620 aa21.58■■□□□ 1.05
CPSF2-202ENST00000553427 HSPA4P34932 840 aa21.58■■□□□ 1.05
CPSF2-202ENST00000553427 SLC16A2P36021 539 aa21.58■■□□□ 1.05
CPSF2-202ENST00000553427 KCTD2Q14681 263 aa21.58■■□□□ 1.05
CPSF2-202ENST00000553427 MTFR1Q15390 333 aa21.58■■□□□ 1.05
CPSF2-202ENST00000553427 OLFML2BQ68BL8 750 aa21.58■■□□□ 1.05
CPSF2-202ENST00000553427 COBLO75128 1261 aa21.57■■□□□ 1.04
CPSF2-202ENST00000553427 ICAM1P05362 532 aa21.57■■□□□ 1.04
CPSF2-202ENST00000553427 PARP1P09874 1014 aaKnown RBP21.57■■□□□ 1.04
CPSF2-202ENST00000553427 CCL5P13501 91 aa21.57■■□□□ 1.04
CPSF2-202ENST00000553427 DPP9Q86TI2 863 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms