RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 ZNF697Q5TEC3 545 aa18■□□□□ 0.47
APEX1-204ENST00000553368 MAMDC4Q6UXC1 1216 aa18■□□□□ 0.47
APEX1-204ENST00000553368 PRPF38AQ8NAV1 312 aaKnown RBP18■□□□□ 0.47
APEX1-204ENST00000553368 MKL1Q969V6 931 aa18■□□□□ 0.47
APEX1-204ENST00000553368 FAM161BQ96MY7 647 aa18■□□□□ 0.47
APEX1-204ENST00000553368 TSEN34Q9BSV6 310 aaKnown RBP18■□□□□ 0.47
APEX1-204ENST00000553368 DCTPP1Q9H773 170 aa18■□□□□ 0.47
APEX1-204ENST00000553368 EPB41L4AQ9HCS5 686 aaPredicted RBP18■□□□□ 0.47
APEX1-204ENST00000553368 SYNGAP1Q96PV0 1343 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 A0A1W2PQ45 241 aaPredicted RBP17.99■□□□□ 0.47
APEX1-204ENST00000553368 A0A1W2PQY0 241 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 KIAA0355O15063 1070 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 RNF113AO15541 343 aaKnown RBP17.99■□□□□ 0.47
APEX1-204ENST00000553368 SNAI1O95863 264 aaPredicted RBP17.99■□□□□ 0.47
APEX1-204ENST00000553368 ZFYP08048 801 aaPredicted RBP17.99■□□□□ 0.47
APEX1-204ENST00000553368 CLTBP09497 229 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 SNRNP48Q6IEG0 339 aaKnown RBP17.99■□□□□ 0.47
APEX1-204ENST00000553368 ZNF467Q7Z7K2 595 aaPredicted RBP17.99■□□□□ 0.47
APEX1-204ENST00000553368 KLHDC9Q8NEP7 349 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 SEMA6BQ9H3T3 888 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 SYNPO2Q9UMS6 1093 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 CNPY2Q9Y2B0 182 aa17.99■□□□□ 0.47
APEX1-204ENST00000553368 UNC80Q8N2C7 3258 aa17.98■□□□□ 0.47
APEX1-204ENST00000553368 GPAA1O43292 621 aa17.98■□□□□ 0.47
APEX1-204ENST00000553368 GNAT2P19087 354 aa17.98■□□□□ 0.47
APEX1-204ENST00000553368 CCSAPQ6IQ19 270 aaPredicted RBP17.98■□□□□ 0.47
APEX1-204ENST00000553368 STK11IPQ8N1F8 1099 aa17.98■□□□□ 0.47
APEX1-204ENST00000553368 LENG1Q96BZ8 264 aaPredicted RBP17.98■□□□□ 0.47
APEX1-204ENST00000553368 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
APEX1-204ENST00000553368 FAM184BQ9ULE4 1060 aa17.98■□□□□ 0.47
APEX1-204ENST00000553368 ZBED4O75132 1171 aa17.97■□□□□ 0.47
APEX1-204ENST00000553368 ACLYP53396 1101 aa17.97■□□□□ 0.47
APEX1-204ENST00000553368 ANKRD33Q7Z3H0 272 aa17.97■□□□□ 0.47
APEX1-204ENST00000553368 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.97■□□□□ 0.47
APEX1-204ENST00000553368 ZNF444Q8N0Y2 327 aaPredicted RBP17.97■□□□□ 0.47
APEX1-204ENST00000553368 TOX2Q96NM4 488 aa17.97■□□□□ 0.47
APEX1-204ENST00000553368 CDX2Q99626 313 aaPredicted RBP17.97■□□□□ 0.47
APEX1-204ENST00000553368 SLC38A10Q9HBR0 1119 aa17.97■□□□□ 0.47
APEX1-204ENST00000553368 MTMR4Q9NYA4 1195 aa17.97■□□□□ 0.47
APEX1-204ENST00000553368 MYH4Q9Y623 1939 aa17.97■□□□□ 0.47
APEX1-204ENST00000553368 SYNRGQ9UMZ2 1314 aa17.97■□□□□ 0.47
APEX1-204ENST00000553368 MOXD2PA6NHM9 499 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 PATL2C9JE40 543 aaKnown RBP17.96■□□□□ 0.47
APEX1-204ENST00000553368 M0R2C6 588 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 EPHB4P54760 987 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 FAAP100Q0VG06 881 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 IFNL3Q8IZI9 196 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 GMCL1P1Q8NEA9 526 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 CEP95Q96GE4 821 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 FGD4Q96M96 766 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 TTYH1Q9H313 450 aaPredicted RBP17.96■□□□□ 0.47
APEX1-204ENST00000553368 ZNF287Q9HBT7 754 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 FEM1BQ9UK73 627 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 CUL9Q8IWT3 2517 aa17.96■□□□□ 0.47
APEX1-204ENST00000553368 DUSP11O75319 330 aaKnown RBP17.95■□□□□ 0.46
APEX1-204ENST00000553368 RAG1P15918 1043 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 CST5P28325 142 aaPredicted RBP17.95■□□□□ 0.46
APEX1-204ENST00000553368 TDO2P48775 406 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 OAZ1P54368 228 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 ACVR2BQ13705 512 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 TSHZ3Q63HK5 1081 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 CPXCR1Q8N123 301 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 NUP133Q8WUM0 1156 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 KIFC2Q96AC6 838 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 COL25A1Q9BXS0 654 aaPredicted RBP17.95■□□□□ 0.46
APEX1-204ENST00000553368 RAVER2Q9HCJ3 691 aaKnown RBP17.95■□□□□ 0.46
APEX1-204ENST00000553368 STARD7Q9NQZ5 370 aa17.95■□□□□ 0.46
APEX1-204ENST00000553368 PLIN4Q96Q06 1357 aa17.94■□□□□ 0.46
APEX1-204ENST00000553368 PQBP1O60828 265 aaKnown RBP17.94■□□□□ 0.46
APEX1-204ENST00000553368 PRDM1O75626 825 aa17.94■□□□□ 0.46
APEX1-204ENST00000553368 TTLL1O95922 423 aa17.94■□□□□ 0.46
APEX1-204ENST00000553368 KCNA10Q16322 511 aa17.94■□□□□ 0.46
APEX1-204ENST00000553368 CHST13Q8NET6 341 aa17.94■□□□□ 0.46
APEX1-204ENST00000553368 NEDD1Q8NHV4 660 aa17.94■□□□□ 0.46
APEX1-204ENST00000553368 TMEM39AQ9NV64 488 aa17.94■□□□□ 0.46
APEX1-204ENST00000553368 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.94■□□□□ 0.46
APEX1-204ENST00000553368 FBXO40Q9UH90 709 aa17.94■□□□□ 0.46
APEX1-204ENST00000553368 ZHX1Q9UKY1 873 aaPredicted RBP17.94■□□□□ 0.46
APEX1-204ENST00000553368 TMEM265A0A087WTH1 108 aa17.93■□□□□ 0.46
APEX1-204ENST00000553368 MYADML2A6NDP7 307 aa17.93■□□□□ 0.46
APEX1-204ENST00000553368 FDX1P10109 184 aa17.93■□□□□ 0.46
APEX1-204ENST00000553368 CDK7P50613 346 aa17.93■□□□□ 0.46
APEX1-204ENST00000553368 FPGSQ05932 587 aa17.93■□□□□ 0.46
APEX1-204ENST00000553368 LRRFIP1Q32MZ4 808 aaKnown RBP17.93■□□□□ 0.46
APEX1-204ENST00000553368 KATNBL1Q9H079 304 aa17.93■□□□□ 0.46
APEX1-204ENST00000553368 UPF3AQ9H1J1 476 aaKnown RBP17.93■□□□□ 0.46
APEX1-204ENST00000553368 ABHD16BQ9H3Z7 469 aa17.93■□□□□ 0.46
APEX1-204ENST00000553368 CTDP1Q9Y5B0 961 aaPredicted RBP17.93■□□□□ 0.46
APEX1-204ENST00000553368 ELP1O95163 1332 aa17.93■□□□□ 0.46
APEX1-204ENST00000553368 DCDC2CA8MYV0 355 aa17.92■□□□□ 0.46
APEX1-204ENST00000553368 ADCY6O43306 1168 aa17.92■□□□□ 0.46
APEX1-204ENST00000553368 APPP05067 770 aa17.92■□□□□ 0.46
APEX1-204ENST00000553368 BMP3P12645 472 aa17.92■□□□□ 0.46
APEX1-204ENST00000553368 GJA9P57773 515 aa17.92■□□□□ 0.46
APEX1-204ENST00000553368 NKX3-2P78367 333 aa17.92■□□□□ 0.46
APEX1-204ENST00000553368 IRX5P78411 483 aaPredicted RBP17.92■□□□□ 0.46
APEX1-204ENST00000553368 SLFN13Q68D06 897 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms