RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 LRRC47Q8N1G4 583 aaKnown RBP11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 FBXL16Q8N461 479 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 CHST13Q8NET6 341 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 CTCFLQ8NI51 663 aaPredicted RBP11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 PXYLP1Q8TE99 480 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 KCNB2Q92953 911 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 TM6SF1Q9BZW5 370 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 IL25Q9H293 177 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 RBPJLQ9UBG7 517 aa11.99□□□□□ -0.49
TRAFD1-208ENST00000552890 B4DLN1 442 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 PRC1O43663 620 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 PDHBP11177 359 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 FCER1AP12319 257 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 RGS2P41220 211 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 MRPL12P52815 198 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 UBXN2AP68543 259 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 ZNF543Q08ER8 600 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 PLS1Q14651 629 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 RIOX2Q8IUF8 465 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 SAMD3Q8N6K7 520 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 KIFC2Q96AC6 838 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 MPHOSPH6Q99547 160 aaKnown RBP11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 PTPN22Q9Y2R2 807 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 SLC12A7Q9Y666 1083 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 CASP8AP2Q9UKL3 1982 aa11.98□□□□□ -0.49
TRAFD1-208ENST00000552890 LOC102724159A0A0B4J2E5 919 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 NMT2O60551 498 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 KCTD2Q14681 263 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 PWP2Q15269 919 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 ANKRD1Q15327 319 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 SLC9C1Q4G0N8 1177 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 SYDE2Q5VT97 1194 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 CLEC10AQ8IUN9 316 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 MB21D2Q8IYB1 491 aaPredicted RBP11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 ATG4CQ96DT6 458 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 USP26Q9BXU7 913 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 R3HDMLQ9H3Y0 253 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 INCENPQ9NQS7 918 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 RBM28Q9NW13 759 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 CYP46A1Q9Y6A2 500 aa11.97□□□□□ -0.49
TRAFD1-208ENST00000552890 PFASO15067 1338 aa11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 ICAM1P05362 532 aa11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 SEC23AQ15436 765 aa11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 MSL3Q8N5Y2 521 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 NKX2-3Q8TAU0 364 aa11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 IGDCC4Q8TDY8 1250 aa11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 ZKSCAN3Q9BRR0 538 aa11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 MCOLN1Q9GZU1 580 aa11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 DIS3Q9Y2L1 958 aaKnown RBP11.96□□□□□ -0.49
TRAFD1-208ENST00000552890 HOXC6P09630 235 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 GRK4P32298 578 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 SNRNP48Q6IEG0 339 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 CPLX2Q6PUV4 134 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 GPR142Q7Z601 462 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 DPP9Q86TI2 863 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 NCAPG2Q86XI2 1143 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 MCF2L2Q86YR7 1114 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 APBA2Q99767 749 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 MOV10L1Q9BXT6 1211 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 ACAD9Q9H845 621 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 MAP3K20Q9NYL2 800 aaKnown RBP11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 BIN2Q9UBW5 565 aaPredicted RBP11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 NRBP1Q9UHY1 535 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 PRR12Q9ULL5 1215 aa11.95□□□□□ -0.5
TRAFD1-208ENST00000552890 KLRF2D3W0D1 207 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 ERCC3P19447 782 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 PTPREP23469 700 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 FLT3LGP49771 235 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 MAP2K5Q13163 448 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 TMEM132BQ14DG7 1078 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 COL13A1Q5TAT6 717 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 MFSD14CQ5VZR4 134 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 CYB5R4Q7L1T6 521 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 SKAP1Q86WV1 359 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 ZNF654Q8IZM8 581 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 ARMC5Q96C12 935 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 TMEM106CQ9BVX2 250 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 RANBP17Q9H2T7 1088 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 LY9Q9HBG7 655 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 TXNRD2Q9NNW7 524 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 FBXO28Q9NVF7 368 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 BTBD7Q9P203 1132 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 ZNF214Q9UL59 606 aaPredicted RBP11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 TACC3Q9Y6A5 838 aa11.94□□□□□ -0.5
TRAFD1-208ENST00000552890 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms