RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 FAM110CQ1W6H9 321 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 NOM1Q5C9Z4 860 aaKnown RBP11.6□□□□□ -0.55
LETMD1-234ENST00000552645 TTBK2Q6IQ55 1244 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 BLOC1S2Q6QNY1 142 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 PRPF38AQ8NAV1 312 aaKnown RBP11.6□□□□□ -0.55
LETMD1-234ENST00000552645 GTF3C2Q8WUA4 911 aaPredicted RBP11.6□□□□□ -0.55
LETMD1-234ENST00000552645 GRPEL1Q9HAV7 217 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 PRDM10Q9NQV6 1147 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 PPP1R9AQ9ULJ8 1098 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 NAP1L2Q9ULW6 460 aaPredicted RBP11.6□□□□□ -0.55
LETMD1-234ENST00000552645 CCDC69A6NI79 296 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 EPB41L2O43491 1005 aaKnown RBP11.6□□□□□ -0.55
LETMD1-234ENST00000552645 HMGB1P09429 215 aaKnown RBP11.6□□□□□ -0.55
LETMD1-234ENST00000552645 SNAP25P60880 206 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 ERVK-24P63145 666 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 Q3C1V9 767 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 POTEEQ6S8J3 1075 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
LETMD1-234ENST00000552645 CATIPQ7Z7H3 387 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 CPXCR1Q8N123 301 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 IGDCC4Q8TDY8 1250 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 CHURC1Q8WUH1 139 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 NUP133Q8WUM0 1156 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 ANKS1AQ92625 1134 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 KCNB2Q92953 911 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 TMEM87BQ96K49 555 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 MYL10Q9BUA6 226 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 LY9Q9HBG7 655 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 BTBD7Q9P203 1132 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 RABGAP1Q9Y3P9 1069 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 TRIM17Q9Y577 477 aa11.6□□□□□ -0.55
LETMD1-234ENST00000552645 BAZ2BQ9UIF8 2168 aaKnown RBP11.6□□□□□ -0.55
LETMD1-234ENST00000552645 A0A0G2JMZ2 1700 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 VWA5AO00534 786 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 SH2B2O14492 632 aaPredicted RBP11.59□□□□□ -0.55
LETMD1-234ENST00000552645 TNPO2O14787 897 aaKnown RBP11.59□□□□□ -0.55
LETMD1-234ENST00000552645 DHX16O60231 1041 aaKnown RBP11.59□□□□□ -0.55
LETMD1-234ENST00000552645 PARP1P09874 1014 aaKnown RBP11.59□□□□□ -0.55
LETMD1-234ENST00000552645 PSMA5P28066 241 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 FCGRTP55899 365 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 CAP1Q01518 475 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 COL13A1Q5TAT6 717 aaPredicted RBP11.59□□□□□ -0.55
LETMD1-234ENST00000552645 FAM160B2Q86V87 743 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 RAB11FIP4Q86YS3 637 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 TBC1D32Q96NH3 1257 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 UPF3BQ9BZI7 483 aaKnown RBP11.59□□□□□ -0.55
LETMD1-234ENST00000552645 CPVLQ9H3G5 476 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 EFCC1Q9HA90 598 aa11.59□□□□□ -0.55
LETMD1-234ENST00000552645 UPF2Q9HAU5 1272 aaKnown RBP11.59□□□□□ -0.55
LETMD1-234ENST00000552645 MYPNQ86TC9 1320 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 ZBED4O75132 1171 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 CNMDO75829 334 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 PTMSP20962 102 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 CTGFP29279 349 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 CCNA1P78396 465 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 ZNF543Q08ER8 600 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 TMEM132BQ14DG7 1078 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 ARHGEF6Q15052 776 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 CCDC174Q6PII3 467 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 LBX2Q6XYB7 198 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 MTERF4Q7Z6M4 381 aaKnown RBP11.58□□□□□ -0.56
LETMD1-234ENST00000552645 CCDC144CPQ8IYA2 1237 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 SMAP1Q8IYB5 467 aaPredicted RBP11.58□□□□□ -0.56
LETMD1-234ENST00000552645 MB21D1Q8N884 522 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 UBA5Q9GZZ9 404 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 PORCNQ9H237 461 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 SLKQ9H2G2 1235 aaPredicted RBP11.58□□□□□ -0.56
LETMD1-234ENST00000552645 CHMP5Q9NZZ3 219 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 MORF4L1Q9UBU8 362 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 PRR12Q9ULL5 1215 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 PLXNB2O15031 1838 aa11.58□□□□□ -0.56
LETMD1-234ENST00000552645 SMCHD1A6NHR9 2005 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 RXRAP19793 462 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 RPS6KB1P23443 525 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 GPATCH4Q5T3I0 446 aaKnown RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 SYDE2Q5VT97 1194 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 SYNE3Q6ZMZ3 975 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 Q6ZUG5 572 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 OTOP1Q7RTM1 612 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 CTU1Q7Z7A3 348 aaKnown RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 NCAPG2Q86XI2 1143 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 ZNF654Q8IZM8 581 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 TMTC2Q8N394 836 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 COA7Q96BR5 231 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 TRIM44Q96DX7 344 aaPredicted RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 SPATC1LQ9H0A9 340 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 RAVER2Q9HCJ3 691 aaKnown RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 VAT1LQ9HCJ6 419 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 SLC12A7Q9Y666 1083 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 CYP46A1Q9Y6A2 500 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 ZNFX1Q9P2E3 1918 aaKnown RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 TRAK2O60296 914 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 SNHG28P0DPA3 235 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 LIFRP42702 1097 aa11.57□□□□□ -0.56
LETMD1-234ENST00000552645 RBM10P98175 930 aaKnown RBP11.57□□□□□ -0.56
LETMD1-234ENST00000552645 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms