RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 ZNF396Q96N95 335 aaPredicted RBP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 BCO2Q9BYV7 579 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 OSBPL7Q9BZF2 842 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 CCSER2Q9H7U1 834 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 RCOR1Q9UKL0 485 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 MRVI1Q9Y6F6 885 aa6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 ZNF142P52746 1687 aaPredicted RBP6.99□□□□□ -1.29
CHMP4A-210ENST00000552620 C1orf167Q5SNV9 1468 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 KIF1AQ12756 1690 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 USP17L7P0C7H9 530 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 HSP90B1P14625 803 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 LIG1P18858 919 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 TARSP26639 723 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 CDC25BP30305 580 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 CABP4P57796 275 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 RBM10P98175 930 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 EXOSC10Q01780 885 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 SPEM2Q0P670 501 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 SF3A1Q15459 793 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 KIAA0319Q5VV43 1072 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 METTL16Q86W50 562 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 DDX54Q8TDD1 881 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 SREK1Q8WXA9 508 aaKnown RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 ZNF274Q96GC6 653 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 ZNF830Q96NB3 372 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 AGXT2Q9BYV1 514 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 TGIF2Q9GZN2 237 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 EHD4Q9H223 541 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 TTC12Q9H892 705 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 CBX8Q9HC52 389 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 DACT1Q9NYF0 836 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 ATXN7L1Q9ULK2 861 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 USP16Q9Y5T5 823 aa6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 KDM6AO15550 1401 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 TRPM3Q9HCF6 1732 aaPredicted RBP6.98□□□□□ -1.29
CHMP4A-210ENST00000552620 SCN11AQ9UI33 1791 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 PALLDQ8WX93 1383 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 AP5Z1O43299 807 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 BNIP3LO60238 219 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 NEMFO60524 1076 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 MMP20O60882 483 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 CIAO1O76071 339 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 THBS1P07996 1170 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 CYP21A2P08686 494 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 NFKB1P19838 968 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 GSTT1P30711 240 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 SOX18P35713 384 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 ST13P50502 369 aaKnown RBP6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 UBAP2LQ14157 1087 aaKnown RBP6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 GRM2Q14416 872 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 DHX8Q14562 1220 aaKnown RBP6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 TAF1CQ15572 869 aaPredicted RBP6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 DBN1Q16643 649 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 ZMYM1Q5SVZ6 1142 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 FOXR1Q6PIV2 292 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 SARM1Q6SZW1 724 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 NXPE4Q6UWF7 544 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 HS2ST1Q7LGA3 356 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 UBE3BQ7Z3V4 1068 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 FERMT3Q86UX7 667 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 KLHDC4Q8TBB5 520 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 BICD2Q8TD16 824 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 BRF1Q92994 677 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 PGBD1Q96JS3 809 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 DBNDD2Q9BQY9 259 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 NDFIP2Q9NV92 336 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 CWC25Q9NXE8 425 aaPredicted RBP6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 KANSL3Q9P2N6 904 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 CTNNA3Q9UI47 895 aa6.97□□□□□ -1.29
CHMP4A-210ENST00000552620 ERVV-2B6SEH9 535 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 GOLGA6L19H0YKK7 550 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 EYA2O00167 538 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 RNF113AO15541 343 aaKnown RBP6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 JAK2O60674 1132 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 MAP3K6O95382 1288 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 ZFYP08048 801 aaPredicted RBP6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 ATF3P18847 181 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 ITGA6P23229 1130 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 ZNF75DP51815 510 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 EVCP57679 992 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 FOXO4P98177 505 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 PLAURQ03405 335 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 RAD51AP2Q09MP3 1159 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 SCRN1Q12765 414 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 HYAL2Q12891 473 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 STK3Q13188 491 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 GNL2Q13823 731 aaKnown RBP6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 SYCP1Q15431 976 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 CAMK4Q16566 473 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 ANO6Q4KMQ2 910 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 LMBR1LQ6UX01 489 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 TREML4Q6UXN2 200 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 CCDC73Q6ZRK6 1079 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 ATG9AQ7Z3C6 839 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 NCAPG2Q86XI2 1143 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 PLA2G4DQ86XP0 818 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 CCDC191Q8NCU4 936 aa6.96□□□□□ -1.3
CHMP4A-210ENST00000552620 ZNF837Q96EG3 531 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms